Gene Page: SLC35A1

Summary
GeneID  10559
Symbol  SLC35A1
Synonyms  CMPST|CST|hCST|inactive
Description  solute carrier family 35 (CMP-sialic acid transporter), member A1
See related  HGNC:11021|MIM:605634|Ensembl:ENSG00000164414|HPRD:09290|
Locus tag  -
Gene type  protein-coding
Map location  6q15
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]Click to show detail
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
ANKZF10.870.84
METTL30.870.84
ZNF1330.870.85
ZNF2660.860.86
ANKRD100.860.84
RBM50.860.84
ZNF1770.860.84
LASS50.850.83
DMTF10.850.85
TRIT10.850.84
Top 10 negatively co-expressed genes
MT-CO2-0.70-0.74
AF347015.27-0.70-0.76
AF347015.8-0.70-0.75
AF347015.31-0.69-0.75
AF347015.15-0.68-0.74
AF347015.33-0.68-0.73
MT-CYB-0.68-0.73
AF347015.2-0.68-0.74
AF347015.21-0.66-0.78
AF347015.26-0.66-0.73
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005351sugar:hydrogen symporter activityIEA-
GO:0005456CMP-sialic acid transmembrane transporter activityTAS9644260 
GO:0005338nucleotide-sugar transmembrane transporter activityIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006464protein modification processTAS9644260 
GO:0005975carbohydrate metabolic processTAS9644260 
GO:0008643carbohydrate transportIEA-
GO:0015782CMP-sialic acid transportTAS9644260 
GO:0015780nucleotide-sugar transportIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0000139Golgi membraneIEA-
GO:0005794Golgi apparatusTAS9644260 
GO:0016020membraneIEA-
GO:0016021integral to membraneIEA-
GO:0005887integral to plasma membraneTAS9644260 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-124.155611Ahsa-miR-124aUUAAGGCACGCGGUGAAUGCCA
miR-1377867921Ahsa-miR-137UAUUGCUUAAGAAUACGCGUAG
miR-1823543601Ahsa-miR-182UUUGGCAAUGGUAGAACUCACA
miR-183617623m8hsa-miR-183UAUGGCACUGGUAGAAUUCACUG
miR-5437677731Ahsa-miR-543AAACAUUCGCGGUGCACUUCU
miR-963533601A,m8hsa-miR-96brainUUUGGCACUAGCACAUUUUUGC
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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