Gene Page: TGOLN2

Summary
GeneID  10618
Symbol  TGOLN2
Synonyms  MGC14722|TGN38|TGN46|TGN48|TGN51|TTGN2
Description  trans-golgi network protein 2
See related  HGNC:15450|MIM:603062|Ensembl:ENSG00000152291|HPRD:04343|
Locus tag  -
Gene type  protein-coding
Map location  2p11.2
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.0004 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
CCNY0.840.89
CHN10.840.81
PPP4R40.840.76
PRKCB0.820.82
RGS40.810.77
DGKB0.800.79
ENSA0.800.85
NRSN10.800.86
NDFIP20.790.88
GCNT40.790.79
Top 10 negatively co-expressed genes
SEMA4B-0.52-0.48
FADS2-0.52-0.42
SH3BP2-0.49-0.54
SMTN-0.48-0.55
FAM59B-0.48-0.43
CDC42EP4-0.47-0.46
GLIS2-0.47-0.44
SH2B2-0.46-0.49
AC006028.3-0.46-0.52
BCL7C-0.46-0.52
Gene Ontology
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005794Golgi apparatusIEA-
GO:0005802trans-Golgi networkTAS9422759 
GO:0016021integral to membraneIEA-
GO:0005886plasma membraneIEA-
GO:0030133transport vesicleTAS9422759 
 
Protein-protein InteractionsShown by network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
AP1M1AP47 | CLAPM2 | CLTNM | MU-1Aadaptor-related protein complex 1, mu 1 subunit-HPRD,BioGRID7569928 
AP1M2AP1-mu2 | HSMU1B | MU-1B | MU1B | mu2adaptor-related protein complex 1, mu 2 subunit-HPRD,BioGRID7569928 
AP2M1AP50 | CLAPM1 | mu2adaptor-related protein complex 2, mu 1 subunitTGN38 interacts with Mu2. This interaction was modeled on a demonstrated interaction between TGN38 from unspecified species and rat Mu2.BIND15916959 
ITGB1CD29 | FNRB | GPIIA | MDF2 | MSK12 | VLA-BETA | VLABintegrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)-HPRD,BioGRID11208159 
PPP1R9AFLJ20068 | KIAA1222 | NRB1 | NRBI | Neurabin-Iprotein phosphatase 1, regulatory (inhibitor) subunit 9A-HPRD10514494 
PPP1R9BFLJ30345 | PPP1R6 | PPP1R9 | SPINO | Spnprotein phosphatase 1, regulatory (inhibitor) subunit 9B-HPRD,BioGRID10514494 
PRKD2HSPC187 | PKD2protein kinase D2-HPRD14743217 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-125/351127912861A,m8hsa-miR-125bbrainUCCCUGAGACCCUAACUUGUGA
hsa-miR-125abrainUCCCUGAGACCCUUUAACCUGUG
miR-17-5p/20/93.mr/106/519.d229235m8hsa-miR-17-5pCAAAGUGCUUACAGUGCAGGUAGU
hsa-miR-20abrainUAAAGUGCUUAUAGUGCAGGUAG
hsa-miR-106aAAAAGUGCUUACAGUGCAGGUAGC
hsa-miR-106bSZUAAAGUGCUGACAGUGCAGAU
hsa-miR-20bSZCAAAGUGCUCAUAGUGCAGGUAG
hsa-miR-519dCAAAGUGCCUCCCUUUAGAGUGU
miR-19220226m8hsa-miR-19aUGUGCAAAUCUAUGCAAAACUGA
hsa-miR-19bUGUGCAAAUCCAUGCAAAACUGA
miR-2141001071A,m8hsa-miR-214brainACAGCAGGCACAGACAGGCAG
miR-9335341m8hsa-miR-9SZUCUUUGGUUAUCUAGCUGUAUGA
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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