Gene Page

Gene Page: STAG2

Summary

GeneID

10735

Symbol

STAG2

Synonyms

DKFZp686P168|DKFZp781H1753|FLJ25871|SA-2|SA2|bA517O1.1

Description

stromal antigen 2

Locus tag

RP11-517O1.1

Gene type

protein-coding

Map location

Xq25

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Expression

P value: 1.585

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

CRMP1

0.95

0.96

DPYSL3

0.94

DOK4

0.94

0.96

FBLIM1

0.94

0.87

AC110814.1

0.94

0.95

DPYSL5

0.93

0.94

PCDHA2

0.93

0.94

C6orf134

0.93

0.96

FARP1

0.93

RHOV

0.92

0.94

Top 10 negatively co-expressed genes

HLA-F

-0.74

-0.79

C5orf53

-0.72

-0.78

AIFM3

-0.72

-0.77

AF347015.27

-0.71

-0.89

AF347015.31

-0.71

-0.89

TSC22D4

-0.71

-0.79

HEPN1

-0.70

-0.78

S100B

-0.70

-0.83

ALDOC

-0.70

-0.71

MT-CO2

-0.70

-0.90

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005488

binding

IEA

GO:0005515

protein binding

IPI

15855230

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0007049

cell cycle

IEA

GO:0007067

mitosis

IEA

GO:0007126

meiosis

IEA

GO:0008150

biological_process

9305759

GO:0007059

chromosome segregation

IEA

GO:0051301

cell division

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005856

cytoskeleton

IDA

18029348

GO:0005634

nucleus

TAS

9305759

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
PDS5A	DKFZp686B19246 \| FLJ41012 \| KIAA0648 \| MGC131948 \| MGC161503 \| PIG54 \| SCC-112	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	Affinity Capture-Western	BioGRID	11076961
RAD21	FLJ25655 \| FLJ40596 \| HR21 \| HRAD21 \| KIAA0078 \| MCD1 \| NXP1 \| SCC1 \| hHR21	RAD21 homolog (S. pombe)	-	HPRD	11590136 \|12034751
STAG1	DKFZp781D1416 \| SA1	stromal antigen 1	-	HPRD,BioGRID	11076961

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-1/206	1397	1403	1A	hsa-miR-1	UGGAAUGUAAAGAAGUAUGUA
				hsa-miR-206^SZ	UGGAAUGUAAGGAAGUGUGUGG
				hsa-miR-613	AGGAAUGUUCCUUCUUUGCC
miR-101	1835	1841	m8	hsa-miR-101	UACAGUACUGUGAUAACUGAAG
miR-124.1	1404	1411	1A,m8	hsa-miR-124a	UUAAGGCACGCGGUGAAUGCCA
miR-124/506	1404	1410	1A	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
miR-124/506	1404	1410	1A	hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-186	1185	1191	m8	hsa-miR-186	CAAAGAAUUCUCCUUUUGGGCUU
miR-203.1	1132	1138	m8	hsa-miR-203	UGAAAUGUUUAGGACCACUAG
miR-21	201	208	1A,m8	hsa-miR-21^brain	UAGCUUAUCAGACUGAUGUUGA
miR-21	201	208	1A,m8	hsa-miR-590	GAGCUUAUUCAUAAAAGUGCAG
miR-214	1666	1672	1A	hsa-miR-214^brain	ACAGCAGGCACAGACAGGCAG
miR-217	648	654	m8	hsa-miR-217	UACUGCAUCAGGAACUGAUUGGAU
miR-22	1298	1305	1A,m8	hsa-miR-22^brain	AAGCUGCCAGUUGAAGAACUGU
miR-25/32/92/363/367	1418	1424	1A	hsa-miR-25^brain	CAUUGCACUUGUCUCGGUCUGA
				hsa-miR-32	UAUUGCACAUUACUAAGUUGC
				hsa-miR-92	UAUUGCACUUGUCCCGGCCUG
				hsa-miR-367	AAUUGCACUUUAGCAAUGGUGA
				hsa-miR-92b^SZ	UAUUGCACUCGUCCCGGCCUC
miR-29	903	909	m8	hsa-miR-29a^SZ	UAGCACCAUCUGAAAUCGGUU
				hsa-miR-29b^SZ	UAGCACCAUUUGAAAUCAGUGUU
				hsa-miR-29c^SZ	UAGCACCAUUUGAAAUCGGU
miR-30-5p	398	405	1A,m8	hsa-miR-30a-5p	UGUAAACAUCCUCGACUGGAAG
				hsa-miR-30c^brain	UGUAAACAUCCUACACUCUCAGC
				hsa-miR-30d^SZ	UGUAAACAUCCCCGACUGGAAG
				hsa-miR-30b^SZ	UGUAAACAUCCUACACUCAGCU
				hsa-miR-30e-5p	UGUAAACAUCCUUGACUGGA
miR-31	1261	1267	1A	hsa-miR-31	AGGCAAGAUGCUGGCAUAGCUG
miR-320	1757	1763	m8	hsa-miR-320	AAAAGCUGGGUUGAGAGGGCGAA
miR-320	1757	1763	m8	hsa-miR-320	AAAAGCUGGGUUGAGAGGGCGAA
miR-324-3p	650	656	1A	hsa-miR-324-3p	CCACUGCCCCAGGUGCUGCUGG
miR-335	1719	1725	1A	hsa-miR-335^brain	UCAAGAGCAAUAACGAAAAAUGU
miR-338	387	393	1A	hsa-miR-338^brain	UCCAGCAUCAGUGAUUUUGUUGA
miR-34/449	657	663	1A	hsa-miR-34a^brain	UGGCAGUGUCUUAGCUGGUUGUU
				hsa-miR-34c	AGGCAGUGUAGUUAGCUGAUUGC
				hsa-miR-449	UGGCAGUGUAUUGUUAGCUGGU
				hsa-miR-449b	AGGCAGUGUAUUGUUAGCUGGC
miR-363	1616	1622	1A	hsa-miR-363	AUUGCACGGUAUCCAUCUGUAA
miR-382	958	964	1A	hsa-miR-382^brain	GAAGUUGUUCGUGGUGGAUUCG
miR-409-5p	667	674	1A,m8	hsa-miR-409-5p	AGGUUACCCGAGCAACUUUGCA
miR-410	885	891	1A	hsa-miR-410	AAUAUAACACAGAUGGCCUGU
miR-490	1121	1127	1A	hsa-miR-490	CAACCUGGAGGACUCCAUGCUG
miR-490	1121	1127	1A	hsa-miR-490	CAACCUGGAGGACUCCAUGCUG
miR-495	927	933	m8	hsa-miR-495^brain	AAACAAACAUGGUGCACUUCUUU
miR-496	1145	1151	1A	hsa-miR-496	AUUACAUGGCCAAUCUC
miR-539	1712	1718	1A	hsa-miR-539	GGAGAAAUUAUCCUUGGUGUGU
miR-544	812	819	1A,m8	hsa-miR-544	AUUCUGCAUUUUUAGCAAGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.