Gene Page: SEC24A

Summary
GeneID  10802
Symbol  SEC24A
Synonyms  -
Description  SEC24 family, member A (S. cerevisiae)
See related  HGNC:10703|MIM:607183|Ensembl:ENSG00000113615|
Locus tag  -
Gene type  protein-coding
Map location  5q31.1
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.0032 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
PUF600.930.92
SEC130.920.91
DDOST0.920.92
STX50.910.89
RUVBL20.910.92
PPP4C0.900.89
APH1A0.900.88
PRMT10.900.91
MAGED20.900.90
THAP110.900.89
Top 10 negatively co-expressed genes
MT-CO2-0.71-0.78
AF347015.33-0.71-0.80
AF347015.27-0.71-0.80
AF347015.31-0.70-0.77
AF347015.8-0.70-0.80
MT-CYB-0.69-0.79
AF347015.15-0.67-0.78
AF347015.26-0.67-0.79
AF347015.2-0.66-0.79
C5orf53-0.66-0.70
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0003674molecular_functionND-
GO:0005515protein bindingIEA-
GO:0008270zinc ion bindingIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0016044membrane organizationEXP11031247 
GO:0006886intracellular protein transportIEA-
GO:0006888ER to Golgi vesicle-mediated transportEXP11252894 
GO:0006888ER to Golgi vesicle-mediated transportNAS-
GO:0016192vesicle-mediated transportIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0000139Golgi membraneIEA-
GO:0005794Golgi apparatusIEA-
GO:0005789endoplasmic reticulum membraneIEA-
GO:0005737cytoplasmIEA-
GO:0005783endoplasmic reticulumIEA-
GO:0016020membraneIEA-
GO:0030127COPII vesicle coatNAS-
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
TRIP1316E1BPthyroid hormone receptor interactor 13Two-hybridBioGRID16189514 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-1011891951Ahsa-miR-101UACAGUACUGUGAUAACUGAAG
miR-1281211281A,m8hsa-miR-128aUCACAGUGAACCGGUCUCUUUU
hsa-miR-128bUCACAGUGAACCGGUCUCUUUC
miR-132/21224132419m8hsa-miR-212SZUAACAGUCUCCAGUCACGGCC
hsa-miR-132brainUAACAGUCUACAGCCAUGGUCG
miR-13324832489m8hsa-miR-133aUUGGUCCCCUUCAACCAGCUGU
hsa-miR-133bUUGGUCCCCUUCAACCAGCUA
miR-1441881951A,m8hsa-miR-144UACAGUAUAGAUGAUGUACUAG
miR-15/16/195/424/4973683741Ahsa-miR-15abrainUAGCAGCACAUAAUGGUUUGUG
hsa-miR-16brainUAGCAGCACGUAAAUAUUGGCG
hsa-miR-15bbrainUAGCAGCACAUCAUGGUUUACA
hsa-miR-195SZUAGCAGCACAGAAAUAUUGGC
hsa-miR-424CAGCAGCAAUUCAUGUUUUGAA
hsa-miR-497CAGCAGCACACUGUGGUUUGU
miR-18120352041m8hsa-miR-181abrainAACAUUCAACGCUGUCGGUGAGU
hsa-miR-181bSZAACAUUCAUUGCUGUCGGUGGG
hsa-miR-181cbrainAACAUUCAACCUGUCGGUGAGU
hsa-miR-181dbrainAACAUUCAUUGUUGUCGGUGGGUU
miR-183214021461Ahsa-miR-183UAUGGCACUGGUAGAAUUCACUG
miR-200bc/429611617m8hsa-miR-200bUAAUACUGCCUGGUAAUGAUGAC
hsa-miR-200cUAAUACUGCCGGGUAAUGAUGG
hsa-miR-429UAAUACUGUCUGGUAAAACCGU
miR-2324932499m8hsa-miR-23abrainAUCACAUUGCCAGGGAUUUCC
hsa-miR-23bbrainAUCACAUUGCCAGGGAUUACC
hsa-miR-23abrainAUCACAUUGCCAGGGAUUUCC
hsa-miR-23bbrainAUCACAUUGCCAGGGAUUACC
miR-27122128m8hsa-miR-27abrainUUCACAGUGGCUAAGUUCCGC
hsa-miR-27bbrainUUCACAGUGGCUAAGUUCUGC
miR-30-5p133713441A,m8hsa-miR-30a-5pUGUAAACAUCCUCGACUGGAAG
hsa-miR-30cbrainUGUAAACAUCCUACACUCUCAGC
hsa-miR-30dSZUGUAAACAUCCCCGACUGGAAG
hsa-miR-30bSZUGUAAACAUCCUACACUCAGCU
hsa-miR-30e-5pUGUAAACAUCCUUGACUGGA
hsa-miR-30a-5pUGUAAACAUCCUCGACUGGAAG
hsa-miR-30cbrainUGUAAACAUCCUACACUCUCAGC
hsa-miR-30dSZUGUAAACAUCCCCGACUGGAAG
hsa-miR-30bSZUGUAAACAUCCUACACUCAGCU
hsa-miR-30e-5pUGUAAACAUCCUUGACUGGA
miR-3205966021Ahsa-miR-320AAAAGCUGGGUUGAGAGGGCGAA
miR-323249324991Ahsa-miR-323brainGCACAUUACACGGUCGACCUCU
hsa-miR-323brainGCACAUUACACGGUCGACCUCU
miR-3756316371Ahsa-miR-375UUUGUUCGUUCGGCUCGCGUGA
miR-379226022661Ahsa-miR-379brainUGGUAGACUAUGGAACGUA
miR-496211421201Ahsa-miR-496AUUACAUGGCCAAUCUC
miR-5033683741Ahsa-miR-503UAGCAGCGGGAACAGUUCUGCAG
miR-5393373441A,m8hsa-miR-539GGAGAAAUUAUCCUUGGUGUGU
miR-726712677m8hsa-miR-7SZUGGAAGACUAGUGAUUUUGUUG
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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