Gene Page: SOX21

Summary
GeneID  11166
Symbol  SOX21
Synonyms  SOX25
Description  SRY (sex determining region Y)-box 21
See related  HGNC:11197|MIM:604974|Ensembl:ENSG00000125285|HPRD:16083|
Locus tag  -
Gene type  protein-coding
Map location  13q31-q32
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
ExpressionExpressionP value: 1.363 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
SSR20.940.95
APEX10.940.95
VPS720.940.95
ILF20.930.93
PHF5A0.930.92
EIF3F0.930.94
EIF3I0.920.94
C17orf450.920.88
BTF30.920.92
SNRPC0.920.94
Top 10 negatively co-expressed genes
MT-CYB-0.66-0.82
AF347015.27-0.65-0.81
MT-CO2-0.65-0.79
AF347015.33-0.65-0.82
APOL1-0.65-0.77
APOL3-0.64-0.78
AF347015.8-0.64-0.81
AF347015.31-0.64-0.77
AF347015.15-0.64-0.81
AF347015.26-0.64-0.84
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0003700transcription factor activityNAS1614875 
GO:0003702RNA polymerase II transcription factor activityTAS10441749 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006357regulation of transcription from RNA polymerase II promoterTAS10441749 
GO:0006350transcriptionIEA-
GO:0006325establishment or maintenance of chromatin architectureNAS1614875 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005634nucleusNAS1614875 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-130/301287293m8hsa-miR-130abrainCAGUGCAAUGUUAAAAGGGCAU
hsa-miR-301CAGUGCAAUAGUAUUGUCAAAGC
hsa-miR-130bbrainCAGUGCAAUGAUGAAAGGGCAU
hsa-miR-454-3pUAGUGCAAUAUUGCUUAUAGGGUUU
miR-189119171Ahsa-miR-18aUAAGGUGCAUCUAGUGCAGAUA
hsa-miR-18bUAAGGUGCAUCUAGUGCAGUUA
miR-19286292m8hsa-miR-19aUGUGCAAAUCUAUGCAAAACUGA
hsa-miR-19bUGUGCAAAUCCAUGCAAAACUGA
miR-330283289m8hsa-miR-330brainGCAAAGCACACGGCCUGCAGAGA
miR-375155515611Ahsa-miR-375UUUGUUCGUUCGGCUCGCGUGA
miR-493-5p109115m8hsa-miR-493-5pUUGUACAUGGUAGGCUUUCAUU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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