Gene Page: CLCN4

Summary
GeneID  1183
Symbol  CLCN4
Synonyms  CLC4|ClC-4|ClC-4A|MGC163150
Description  chloride channel 4
See related  HGNC:2022|MIM:302910|Ensembl:ENSG00000073464|HPRD:02362|
Locus tag  -
Gene type  protein-coding
Map location  Xp22.3
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
ExpressionExpressionP value: 1.487 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
EFNA40.830.60
TEAD20.830.65
CDK20.820.59
AC087645.20.800.48
PPIL50.800.54
UBE2C0.800.47
FAM64A0.800.46
CNN30.790.59
BIRC50.790.43
CDC200.790.45
Top 10 negatively co-expressed genes
ANKRD24-0.44-0.59
SYNM-0.44-0.58
LARP6-0.44-0.58
TSPYL2-0.43-0.60
SPTBN4-0.43-0.60
GLT25D2-0.42-0.56
BCL2L2-0.42-0.52
Z68873.1-0.42-0.60
EPB49-0.42-0.55
MCF2L2-0.42-0.57
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005244voltage-gated ion channel activityIEA-
GO:0005247voltage-gated chloride channel activityIEA-
GO:0005247voltage-gated chloride channel activityTAS8069296 
GO:0031404chloride ion bindingIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006821chloride transportIDA10564087 
GO:0006821chloride transportIEA-
GO:0006811ion transportIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0016020membraneIEA-
GO:0016021integral to membraneIEA-
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-326170917161A,m8hsa-miR-326CCUCUGGGCCCUUCCUCCAG
miR-378*3853911Ahsa-miR-422bCUGGACUUGGAGUCAGAAGGCC
hsa-miR-422aCUGGACUUAGGGUCAGAAGGCC
miR-93.hd/291-3p/294/295/302/372/373/520862868m8hsa-miR-93brainAAAGUGCUGUUCGUGCAGGUAG
hsa-miR-302aUAAGUGCUUCCAUGUUUUGGUGA
hsa-miR-302bUAAGUGCUUCCAUGUUUUAGUAG
hsa-miR-302cUAAGUGCUUCCAUGUUUCAGUGG
hsa-miR-302dUAAGUGCUUCCAUGUUUGAGUGU
hsa-miR-372AAAGUGCUGCGACAUUUGAGCGU
hsa-miR-373GAAGUGCUUCGAUUUUGGGGUGU
hsa-miR-520eAAAGUGCUUCCUUUUUGAGGG
hsa-miR-520aAAAGUGCUUCCCUUUGGACUGU
hsa-miR-520bAAAGUGCUUCCUUUUAGAGGG
hsa-miR-520cAAAGUGCUUCCUUUUAGAGGGUU
hsa-miR-520dAAAGUGCUUCUCUUUGGUGGGUU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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