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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: TMEM198

Summary

GeneID

130612

Symbol

TMEM198

Synonyms

FLJ41180|MGC99813

Description

transmembrane protein 198

Locus tag

Gene type

protein-coding

Map location

2q35

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIA

genome scan meta-analysis (All samples)

Psr: 0.00916

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.01016

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0016020

membrane

IEA

GO:0016021

integral to membrane

IEA

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-125/351	235	241	m8	hsa-miR-125b^brain	UCCCUGAGACCCUAACUUGUGA
miR-125/351	235	241	m8	hsa-miR-125a^brain	UCCCUGAGACCCUUUAACCUGUG
miR-138	29	35	m8	hsa-miR-138^brain	AGCUGGUGUUGUGAAUC
miR-138	29	35	m8	hsa-miR-138^brain	AGCUGGUGUUGUGAAUC
miR-182	714	720	1A	hsa-miR-182	UUUGGCAAUGGUAGAACUCACA
miR-96	713	720	1A,m8	hsa-miR-96^brain	UUUGGCACUAGCACAUUUUUGC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.