Gene Page

Home
Datasets
Search
Analysis & Tools
Documents
About SZGR
Quick search: (e.g. 207 or AKT)

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

Release Site Map Support Contact us

Gene Page: DDB1

Summary

GeneID

1642

Symbol

DDB1

Synonyms

DDBA|UV-DDB1|XAP1|XPCE|XPE|XPE-BF

Description

damage-specific DNA binding protein 1, 127kDa

See related

HGNC:2717|MIM:600045|Ensembl:ENSG00000167986|HPRD:10952|

Locus tag

-

Gene type

protein-coding

Map location

11q12-q13

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Shortest path distance of core genes in the Human protein-protein interaction network

Contribution to shortest path in PPI network: 0.0156

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

ZFX

0.93

0.94

SAPS3

0.93

0.93

AP1G1

0.93

0.94

NPAT

0.93

0.95

THUMPD1

0.93

0.95

FAF2

0.92

0.93

DYRK1A

0.92

0.94

ZRANB1

0.92

0.94

USP9X

0.92

0.95

HECTD1

0.92

0.94

Top 10 negatively co-expressed genes

AF347015.31

-0.76

-0.82

FXYD1

-0.76

-0.81

MT-CO2

-0.75

-0.81

AF347015.21

-0.75

-0.85

HIGD1B

-0.73

-0.81

IFI27

-0.72

-0.79

AF347015.27

-0.72

-0.77

AF347015.33

-0.72

-0.76

AF347015.8

-0.71

-0.78

AC021016.1

-0.70

-0.75

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

damaged DNA binding

TAS

protein binding

IPI

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

cell cycle checkpoint

IMP

nucleotide-excision repair, DNA damage removal

EXP

ubiquitin-dependent protein catabolic process

IEA

-

interspecies interaction between organisms

IEA

-

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

nucleus

IEA

-

nucleoplasm

EXP

cytoplasm

IEA

-

Protein-protein Interactions

Shown by network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
CDT1	DUP \| RIS2	chromatin licensing and DNA replication factor 1	DDB1 interacts with CDT1.	BIND	15448697
CUL4A	-	cullin 4A	DDB1 interacts with CUL4A.	BIND	15448697
CUL4A	-	cullin 4A	DDB1 Interacts with CUL4A.	BIND	14739464
DDB2	DDBB \| FLJ34321 \| UV-DDB2	damage-specific DNA binding protein 2, 48kDa	DDB1 interacts with DDB2. This interaction was modeled on a demonstrated interaction between hamster DDB1 and human DDB2.	BIND	15882621
DDB2	DDBB \| FLJ34321 \| UV-DDB2	damage-specific DNA binding protein 2, 48kDa	-	HPRD,BioGRID	12050362
DET1	FLJ10103 \| MGC126156 \| MGC126157	de-etiolated homolog 1 (Arabidopsis)	-	HPRD,BioGRID	14739464
DET1	FLJ10103 \| MGC126156 \| MGC126157	de-etiolated homolog 1 (Arabidopsis)	hDET1 interacts with DDB1.	BIND	14739464
IKBKG	AMCBX1 \| FIP-3 \| FIP3 \| Fip3p \| IKK-gamma \| IP \| IP1 \| IP2 \| IPD2 \| NEMO	inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma	-	HPRD	14743216
MAP3K3	MAPKKK3 \| MEKK3	mitogen-activated protein kinase kinase kinase 3	-	HPRD	14743216
RFWD2	COP1 \| FLJ10416 \| RNF200	ring finger and WD repeat domain 2	Affinity Capture-Western	BioGRID	14739464
TNFRSF1B	CD120b \| TBPII \| TNF-R-II \| TNF-R75 \| TNFBR \| TNFR1B \| TNFR2 \| TNFR80 \| p75 \| p75TNFR	tumor necrosis factor receptor superfamily, member 1B	-	HPRD	14743216

Copyright © Bioinformatics and Systems Medicine Laboratory All Rights Reserved since 2009.