Gene Page: BPTF

Summary
GeneID  2186
Symbol  BPTF
Synonyms  FAC1|FALZ|NURF301
Description  bromodomain PHD finger transcription factor
See related  HGNC:3581|MIM:601819|Ensembl:ENSG00000171634|HPRD:03490|
Locus tag  -
Gene type  protein-coding
Map location  17q24.3
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 1 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
NID20.780.79
SVIL0.780.83
QSER10.770.78
COL4A10.750.79
ZNF8520.750.76
KIAA13050.750.83
NID10.750.76
CPAMD80.750.61
ZNF1210.750.74
BEND30.740.82
Top 10 negatively co-expressed genes
LHPP-0.48-0.53
C5orf53-0.46-0.71
FBXO2-0.45-0.58
HLA-F-0.45-0.66
ALDOC-0.44-0.59
AIFM3-0.43-0.60
SLC16A11-0.43-0.55
FAM162A-0.43-0.60
S100B-0.43-0.69
ACOT13-0.43-0.60
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005515protein bindingIEA-
GO:0008270zinc ion bindingIEA-
GO:0008134transcription factor bindingIDA10727212 
GO:0008094DNA-dependent ATPase activityIDA14609955 
GO:0030528transcription regulator activityIMP14609955 
GO:0046872metal ion bindingIEA-
GO:0043565sequence-specific DNA bindingIDA10403843 
GO:0043565sequence-specific DNA bindingIMP10575013 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0007420brain developmentIMPBrain (GO term level: 7)14609955 
GO:0000122negative regulation of transcription from RNA polymerase II promoterIDA10727212 
GO:0006355regulation of transcription, DNA-dependentIEA-
GO:0006338chromatin remodelingIDA14609955 
GO:0043193positive regulation of gene-specific transcriptionIMP14609955 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005634nucleusIDA10403843 |14609955 
GO:0005737cytoplasmTAS7621746 
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
MAZPUR1 | Pur-1 | SAF-1 | SAF-2 | ZF87 | ZNF801 | Zif87MYC-associated zinc finger protein (purine-binding transcription factor)-HPRD,BioGRID10727212 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-129-5p4034101A,m8hsa-miR-129brainCUUUUUGCGGUCUGGGCUUGC
hsa-miR-129-5pCUUUUUGCGGUCUGGGCUUGCU
miR-130/301143714441A,m8hsa-miR-130abrainCAGUGCAAUGUUAAAAGGGCAU
hsa-miR-301CAGUGCAAUAGUAUUGUCAAAGC
hsa-miR-130bbrainCAGUGCAAUGAUGAAAGGGCAU
hsa-miR-454-3pUAGUGCAAUAUUGCUUAUAGGGUUU
miR-1368428491A,m8hsa-miR-136ACUCCAUUUGUUUUGAUGAUGGA
miR-15/16/195/424/4975635691Ahsa-miR-15abrainUAGCAGCACAUAAUGGUUUGUG
hsa-miR-16brainUAGCAGCACGUAAAUAUUGGCG
hsa-miR-15bbrainUAGCAGCACAUCAUGGUUUACA
hsa-miR-195SZUAGCAGCACAGAAAUAUUGGC
hsa-miR-424CAGCAGCAAUUCAUGUUUUGAA
hsa-miR-497CAGCAGCACACUGUGGUUUGU
miR-153152915361A,m8hsa-miR-153UUGCAUAGUCACAAAAGUGA
miR-181880886m8hsa-miR-181abrainAACAUUCAACGCUGUCGGUGAGU
hsa-miR-181bSZAACAUUCAUUGCUGUCGGUGGG
hsa-miR-181cbrainAACAUUCAACCUGUCGGUGAGU
hsa-miR-181dbrainAACAUUCAUUGUUGUCGGUGGGUU
miR-1914361442m8hsa-miR-19aUGUGCAAAUCUAUGCAAAACUGA
hsa-miR-19bUGUGCAAAUCCAUGCAAAACUGA
miR-200bc/42918891895m8hsa-miR-200bUAAUACUGCCUGGUAAUGAUGAC
hsa-miR-200cUAAUACUGCCGGGUAAUGAUGG
hsa-miR-429UAAUACUGUCUGGUAAAACCGU
miR-203.1204820551A,m8hsa-miR-203UGAAAUGUUUAGGACCACUAG
miR-20511741180m8hsa-miR-205UCCUUCAUUCCACCGGAGUCUG
miR-24*197519821A,m8hsa-miR-189GUGCCUACUGAGCUGAUAUCAGU
miR-3765515581A,m8hsa-miR-376aAUCAUAGAGGAAAAUCCACGU
hsa-miR-376bAUCAUAGAGGAAAAUCCAUGUU
miR-433-3p499505m8hsa-miR-433brainAUCAUGAUGGGCUCCUCGGUGU
miR-448153015361Ahsa-miR-448UUGCAUAUGUAGGAUGUCCCAU
miR-4504034091Ahsa-miR-450UUUUUGCGAUGUGUUCCUAAUA
miR-5035635691Ahsa-miR-503UAGCAGCGGGAACAGUUCUGCAG
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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