Gene Page: COPG

Summary
GeneID  22820
Symbol  COPG
Synonyms  COPG1|FLJ21068
Description  coatomer protein complex, subunit gamma
See related  HGNC:2236|Ensembl:ENSG00000181789|HPRD:09887|
Locus tag  -
Gene type  protein-coding
Map location  3q21.3
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
NetworkShortest path distance of core genes in the Human protein-protein interaction networkContribution to shortest path in PPI network: 1.0238 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
ADAR0.950.96
OSBP0.940.94
FTO0.940.94
PDE120.930.94
GTF3C10.930.93
ADD10.930.93
SMG70.930.93
UBE4B0.930.92
GAPVD10.930.93
GLG10.920.93
Top 10 negatively co-expressed genes
AF347015.31-0.75-0.78
AF347015.21-0.75-0.80
MT-CO2-0.75-0.78
HIGD1B-0.72-0.76
AF347015.8-0.72-0.76
FXYD1-0.72-0.74
AF347015.33-0.71-0.72
MT-CYB-0.70-0.72
AF347015.27-0.69-0.73
C1orf54-0.69-0.80
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005515protein bindingIPI17353931 
GO:0005198structural molecule activityIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0016044membrane organizationEXP11031247 
GO:0006886intracellular protein transportIEA-
GO:0006890retrograde vesicle-mediated transport, Golgi to EREXP11031247 
GO:0016192vesicle-mediated transportIEA-
GO:0048205COPI coating of Golgi vesicleEXP16956762 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0000139Golgi membraneIEA-
GO:0005794Golgi apparatusIEA-
GO:0005798Golgi-associated vesicleIEA-
GO:0005829cytosolEXP8533093 |8599108 
GO:0005737cytoplasmIEA-
GO:0030117membrane coatIEA-
GO:0016020membraneIEA-
GO:0031410cytoplasmic vesicleIEA-
GO:0030126COPI vesicle coatISS-
 
Protein-protein InteractionsShown by network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
ARF1-ADP-ribosylation factor 1Affinity Capture-WesternBioGRID10720466 
BRF2BRFU | FLJ11052 | TFIIIB50BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-likeAffinity Capture-MSBioGRID17353931 
COPB1COPB | DKFZp761K102 | FLJ10341coatomer protein complex, subunit beta 1-HPRD,BioGRID11056392 
COPB2beta'-COPcoatomer protein complex, subunit beta 2 (beta prime)Two-hybridBioGRID10921873 
COPEFLJ13241 | epsilon-COPcoatomer protein complex, subunit epsilonTwo-hybridBioGRID10921873 
COPG22-COP | DKFZp761N09121 | FLJ11781coatomer protein complex, subunit gamma 2-HPRD,BioGRID11056392 
COPZ1CGI-120 | COPZ | zeta1-COPcoatomer protein complex, subunit zeta 1Gamma-COP interacts with zeta-COP. This interaction was modelled on a demonstrated interaction between rabbit gamma-COP and rabbit zeta-COP.BIND9482852 
-HPRD,BioGRID11056392 
COPZ2MGC23008coatomer protein complex, subunit zeta 2-HPRD,BioGRID11056392 
DRD1DADR | DRD1Adopamine receptor D1-HPRD,BioGRID11893085 
HLA-AHLAAmajor histocompatibility complex, class I, AAffinity Capture-WesternBioGRID11884415 
ILKDKFZp686F1765 | P59integrin-linked kinaseAffinity Capture-MSBioGRID17353931 
MAGED1DLXIN-1 | NRAGEmelanoma antigen family D, 1Affinity Capture-MSBioGRID17353931 
PHB2BAP | BCAP37 | Bap37 | MGC117268 | PNAS-141 | REA | p22prohibitin 2Affinity Capture-MSBioGRID17353931 
PTGES3P23 | TEBP | cPGESprostaglandin E synthase 3 (cytosolic)-HPRD,BioGRID11056392 
SACM1LDKFZp686A0231 | KIAA0851 | SAC1SAC1 suppressor of actin mutations 1-like (yeast)hSac1 interacts with gamma-COP.BIND14527956 
TAP1ABC17 | ABCB2 | APT1 | D6S114E | FLJ26666 | FLJ41500 | PSF1 | RING4 | TAP1*0102N | TAP1Ntransporter 1, ATP-binding cassette, sub-family B (MDR/TAP)Affinity Capture-WesternBioGRID11884415 
TAPBPNGS17 | TAPA | TPN | TPSN | tapasinTAP binding protein (tapasin)-HPRD,BioGRID11884415 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-142-3p3743m8hsa-miR-142-3pUGUAGUGUUUCCUACUUUAUGGA
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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