Gene Page: ABLIM3

Summary
GeneID  22885
Symbol  ABLIM3
Synonyms  HMFN1661
Description  actin binding LIM protein family, member 3
See related  HGNC:29132|MIM:611305|Ensembl:ENSG00000173210|HPRD:12411|
Locus tag  -
Gene type  protein-coding
Map location  5q33.1
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.0032 
GSMA_IIAgenome scan meta-analysis (All samples)Psr: 0.00459 
GSMA_IIEgenome scan meta-analysis (European-ancestry samples)Psr: 0.01718 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
SYVN10.910.91
CLCN70.900.90
DPP90.880.88
KIAA06640.880.88
NACAD0.880.88
GAK0.870.88
PLEKHM10.870.88
C2orf180.860.87
FURIN0.860.86
FOXRED20.860.86
Top 10 negatively co-expressed genes
AF347015.21-0.64-0.60
GNG11-0.62-0.60
C1orf54-0.61-0.60
SYCP3-0.60-0.64
AL050337.1-0.59-0.65
CLEC2B-0.59-0.60
AF347015.31-0.57-0.50
MT-CO2-0.54-0.49
NOSTRIN-0.54-0.48
IL32-0.52-0.50
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0003779actin bindingIEA-
GO:0008270zinc ion bindingNAS-
GO:0046872metal ion bindingIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0007010cytoskeleton organizationIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005737cytoplasmNAS-
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
ACTC1ACTC | CMD1R | CMH11actin, alpha, cardiac muscle 1-HPRD,BioGRID15337165 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-101124130m8hsa-miR-101UACAGUACUGUGAUAACUGAAG
miR-148/152151215181Ahsa-miR-148aUCAGUGCACUACAGAACUUUGU
hsa-miR-152brainUCAGUGCAUGACAGAACUUGGG
hsa-miR-148bUCAGUGCAUCACAGAACUUUGU
miR-214149715041A,m8hsa-miR-214brainACAGCAGGCACAGACAGGCAG
miR-21820132019m8hsa-miR-218brainUUGUGCUUGAUCUAACCAUGU
miR-376c920926m8hsa-miR-376cAACAUAGAGGAAAUUCCACG
miR-41028341Ahsa-miR-410AAUAUAACACAGAUGGCCUGU
miR-495197719831Ahsa-miR-495brainAAACAAACAUGGUGCACUUCUUU
miR-49642481Ahsa-miR-496AUUACAUGGCCAAUCUC
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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