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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: ARL6IP1

Summary

GeneID

23204

Symbol

ARL6IP1

Synonyms

AIP1|ARL6IP|ARMER|KIAA0069

Description

ADP-ribosylation factor-like 6 interacting protein 1

Locus tag

Gene type

protein-coding

Map location

16p12-p11.2

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.01775

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005515

protein binding

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006613

cotranslational protein targeting to membrane

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0012505

endomembrane system

IEA

GO:0005829

cytosol

IEA

GO:0005737

cytoplasm

IEA

GO:0005784

translocon complex

IEA

GO:0016020

membrane

IEA

GO:0016021

integral to membrane

IEA

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
ARL4D	ARF4L \| ARL6	ADP-ribosylation factor-like 4D	-	HPRD	10508919
ARL6	BBS3 \| MGC32934	ADP-ribosylation factor-like 6	-	HPRD,BioGRID	10508919
FBXW7	AGO \| CDC4 \| DKFZp686F23254 \| FBW6 \| FBW7 \| FBX30 \| FBXO30 \| FBXW6 \| FLJ16457 \| SEL-10 \| SEL10	F-box and WD repeat domain containing 7	Two-hybrid	BioGRID	16169070
FDFT1	DGPT \| ERG9 \| SQS \| SS	farnesyl-diphosphate farnesyltransferase 1	Two-hybrid	BioGRID	16169070
FXR2	FMR1L2	fragile X mental retardation, autosomal homolog 2	Two-hybrid	BioGRID	16189514
INPP5K	PPS \| SKIP	inositol polyphosphate-5-phosphatase K	Two-hybrid	BioGRID	16189514

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-148/152	1282	1289	1A,m8	hsa-miR-148a	UCAGUGCACUACAGAACUUUGU
				hsa-miR-152^brain	UCAGUGCAUGACAGAACUUGGG
				hsa-miR-148b	UCAGUGCAUCACAGAACUUUGU
miR-150	517	523	1A	hsa-miR-150	UCUCCCAACCCUUGUACCAGUG
miR-221/222	1373	1379	1A	hsa-miR-221^brain	AGCUACAUUGUCUGCUGGGUUUC
miR-221/222	1373	1379	1A	hsa-miR-222^brain	AGCUACAUCUGGCUACUGGGUCUC
miR-486	384	390	1A	hsa-miR-486	UCCUGUACUGAGCUGCCCCGAG

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.