Gene Page: PHF15

Summary
GeneID  23338
Symbol  PHF15
Synonyms  JADE2|KIAA0239
Description  PHD finger protein 15
See related  HGNC:22984|MIM:610515|Ensembl:ENSG00000043143|HPRD:15124|
Locus tag  -
Gene type  protein-coding
Map location  5q31.1
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.0032 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
JDP20.750.74
NGEF0.740.59
KCNT10.740.69
CCNI20.720.80
TMEM38A0.720.75
KCNH40.710.69
AC051642.20.710.67
VIPR20.700.71
CX3CL10.700.75
HRH20.680.50
Top 10 negatively co-expressed genes
UBE2L6-0.53-0.62
COTL1-0.52-0.56
TUBB2B-0.51-0.65
IDH1-0.50-0.60
KIAA1949-0.50-0.57
PPP1R14B-0.49-0.69
CBS-0.49-0.59
CARHSP1-0.49-0.61
AF186192.1-0.49-0.59
YBX1-0.49-0.61
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005515protein bindingIEA-
GO:0008270zinc ion bindingIEA-
GO:0046872metal ion bindingIEA-
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-125/351724730m8hsa-miR-125bbrainUCCCUGAGACCCUAACUUGUGA
hsa-miR-125abrainUCCCUGAGACCCUUUAACCUGUG
hsa-miR-125bbrainUCCCUGAGACCCUAACUUGUGA
hsa-miR-125abrainUCCCUGAGACCCUUUAACCUGUG
miR-126/126-3p175117571Ahsa-miR-126brainUCGUACCGUGAGUAAUAAUGC
miR-137369837041Ahsa-miR-137UAUUGCUUAAGAAUACGCGUAG
miR-148/1525345401Ahsa-miR-148aUCAGUGCACUACAGAACUUUGU
hsa-miR-152brainUCAGUGCAUGACAGAACUUGGG
hsa-miR-148bUCAGUGCAUCACAGAACUUUGU
miR-14933303336m8hsa-miR-149brainUCUGGCUCCGUGUCUUCACUCC
hsa-miR-149brainUCUGGCUCCGUGUCUUCACUCC
miR-15/16/195/424/49715271533m8hsa-miR-15abrainUAGCAGCACAUAAUGGUUUGUG
hsa-miR-16brainUAGCAGCACGUAAAUAUUGGCG
hsa-miR-15bbrainUAGCAGCACAUCAUGGUUUACA
hsa-miR-195SZUAGCAGCACAGAAAUAUUGGC
hsa-miR-424CAGCAGCAAUUCAUGUUUUGAA
hsa-miR-497CAGCAGCACACUGUGGUUUGU
hsa-miR-15abrainUAGCAGCACAUAAUGGUUUGUG
hsa-miR-16brainUAGCAGCACGUAAAUAUUGGCG
hsa-miR-15bbrainUAGCAGCACAUCAUGGUUUACA
hsa-miR-195SZUAGCAGCACAGAAAUAUUGGC
hsa-miR-424CAGCAGCAAUUCAUGUUUUGAA
hsa-miR-497CAGCAGCACACUGUGGUUUGU
hsa-miR-15abrainUAGCAGCACAUAAUGGUUUGUG
hsa-miR-16brainUAGCAGCACGUAAAUAUUGGCG
hsa-miR-15bbrainUAGCAGCACAUCAUGGUUUACA
hsa-miR-195SZUAGCAGCACAGAAAUAUUGGC
hsa-miR-424CAGCAGCAAUUCAUGUUUUGAA
hsa-miR-497CAGCAGCACACUGUGGUUUGU
miR-18134523458m8hsa-miR-181abrainAACAUUCAACGCUGUCGGUGAGU
hsa-miR-181bSZAACAUUCAUUGCUGUCGGUGGG
hsa-miR-181cbrainAACAUUCAACCUGUCGGUGAGU
hsa-miR-181dbrainAACAUUCAUUGUUGUCGGUGGGUU
miR-182136913751Ahsa-miR-182UUUGGCAAUGGUAGAACUCACA
miR-18335023508m8hsa-miR-183UAUGGCACUGGUAGAAUUCACUG
miR-186336233681Ahsa-miR-186CAAAGAAUUCUCCUUUUGGGCUU
miR-19337273733m8hsa-miR-193aAACUGGCCUACAAAGUCCCAG
hsa-miR-193bAACUGGCCCUCAAAGUCCCGCUUU
hsa-miR-193aAACUGGCCUACAAAGUCCCAG
hsa-miR-193bAACUGGCCCUCAAAGUCCCGCUUU
hsa-miR-193aAACUGGCCUACAAAGUCCCAG
hsa-miR-193bAACUGGCCCUCAAAGUCCCGCUUU
miR-21481871Ahsa-miR-214brainACAGCAGGCACAGACAGGCAG
miR-2185095161A,m8hsa-miR-218brainUUGUGCUUGAUCUAACCAUGU
miR-25/32/92/363/367357935851Ahsa-miR-25brainCAUUGCACUUGUCUCGGUCUGA
hsa-miR-32UAUUGCACAUUACUAAGUUGC
hsa-miR-92UAUUGCACUUGUCCCGGCCUG
hsa-miR-367AAUUGCACUUUAGCAAUGGUGA
hsa-miR-92bSZUAUUGCACUCGUCCCGGCCUC
miR-30-5p20022008m8hsa-miR-30a-5pUGUAAACAUCCUCGACUGGAAG
hsa-miR-30cbrainUGUAAACAUCCUACACUCUCAGC
hsa-miR-30dSZUGUAAACAUCCCCGACUGGAAG
hsa-miR-30bSZUGUAAACAUCCUACACUCAGCU
hsa-miR-30e-5pUGUAAACAUCCUUGACUGGA
miR-328777783m8hsa-miR-328brainCUGGCCCUCUCUGCCCUUCCGU
miR-33020392045m8hsa-miR-330brainGCAAAGCACACGGCCUGCAGAGA
miR-3317267321Ahsa-miR-331brainGCCCCUGGGCCUAUCCUAGAA
miR-338106210681Ahsa-miR-338brainUCCAGCAUCAGUGAUUUUGUUGA
miR-34/44964701Ahsa-miR-34abrainUGGCAGUGUCUUAGCUGGUUGUU
hsa-miR-34cAGGCAGUGUAGUUAGCUGAUUGC
hsa-miR-449UGGCAGUGUAUUGUUAGCUGGU
hsa-miR-449bAGGCAGUGUAUUGUUAGCUGGC
miR-34b20072013m8hsa-miR-34bUAGGCAGUGUCAUUAGCUGAUUG
miR-3653573641A,m8hsa-miR-365UAAUGCCCCUAAAAAUCCUUAU
miR-378*13361342m8hsa-miR-422bCUGGACUUGGAGUCAGAAGGCC
hsa-miR-422aCUGGACUUAGGGUCAGAAGGCC
miR-38135943600m8hsa-miR-381UAUACAAGGGCAAGCUCUCUGU
miR-494348434901Ahsa-miR-494brainUGAAACAUACACGGGAAACCUCUU
miR-495350835141Ahsa-miR-495brainAAACAAACAUGGUGCACUUCUUU
miR-53936553661m8hsa-miR-539GGAGAAAUUAUCCUUGGUGUGU
miR-542-3p5025091A,m8hsa-miR-542-3pUGUGACAGAUUGAUAACUGAAA
hsa-miR-542-3pUGUGACAGAUUGAUAACUGAAA
miR-9137113771Ahsa-miR-9SZUCUUUGGUUAUCUAGCUGUAUGA
miR-96136913751Ahsa-miR-96brainUUUGGCACUAGCACAUUUUUGC
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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