Gene Page

Gene Page: FNBP4

Summary

GeneID

23360

Symbol

FNBP4

Synonyms

DKFZp686M14102|DKFZp779I1064|FBP30|FLJ41904|KIAA1014

Description

formin binding protein 4

Locus tag

Gene type

protein-coding

Map location

11p11.2

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Shortest path distance of core genes in the Human protein-protein interaction network

Contribution to shortest path in PPI network: 1.7713

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

protein binding

IEA

Interactions

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
FYN	MGC45350 \| SLK \| SYN	FYN oncogene related to SRC, FGR, YES	-	HPRD,BioGRID	10744724
KHDRBS1	FLJ34027 \| Sam68 \| p62	KH domain containing, RNA binding, signal transduction associated 1	-	HPRD,BioGRID	10748127
LBR	DHCR14B \| FLJ43126 \| LMN2R \| MGC9041 \| PHA	lamin B receptor	-	HPRD,BioGRID	10744724
SNRPB	COD \| SNRPB1 \| SmB/SmB' \| snRNP-B	small nuclear ribonucleoprotein polypeptides B and B1	Protein-peptide	BioGRID	11604498
SYNJ1	INPP5G	synaptojanin 1	-	HPRD	11292345

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-17-5p/20/93.mr/106/519.d	793	799	1A	hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAGU
				hsa-miR-20a^brain	UAAAGUGCUUAUAGUGCAGGUAG
				hsa-miR-106a	AAAAGUGCUUACAGUGCAGGUAGC
				hsa-miR-106b^SZ	UAAAGUGCUGACAGUGCAGAU
				hsa-miR-20b^SZ	CAAAGUGCUCAUAGUGCAGGUAG
				hsa-miR-519d	CAAAGUGCCUCCCUUUAGAGUGU
miR-219	777	783	1A	hsa-miR-219^brain	UGAUUGUCCAAACGCAAUUCU
miR-22	372	378	m8	hsa-miR-22^brain	AAGCUGCCAGUUGAAGAACUGU
miR-25/32/92/363/367	359	365	m8	hsa-miR-25^brain	CAUUGCACUUGUCUCGGUCUGA
				hsa-miR-32	UAUUGCACAUUACUAAGUUGC
				hsa-miR-92	UAUUGCACUUGUCCCGGCCUG
				hsa-miR-367	AAUUGCACUUUAGCAAUGGUGA
				hsa-miR-92b^SZ	UAUUGCACUCGUCCCGGCCUC
miR-330	203	210	1A,m8	hsa-miR-330^brain	GCAAAGCACACGGCCUGCAGAGA
miR-539	839	845	m8	hsa-miR-539	GGAGAAAUUAUCCUUGGUGUGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.