Gene Page

Gene Page: KIAA0240

Summary

GeneID

23506

Symbol

KIAA0240

Synonyms

DKFZp686P0250

Description

KIAA0240

Locus tag

Gene type

protein-coding

Map location

6p21.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_I

genome scan meta-analysis

Psr: 0.033

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.04433

Literature

High-throughput literature-search

Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]

Click to show detail

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

COMT

0.67

0.63

MRPL41

0.66

0.61

JOSD2

0.66

0.72

HLA-C

0.65

0.60

SLC15A3

0.65

0.57

MSRB2

0.64

0.65

CDK2AP2

0.63

0.58

NDUFA3

0.63

0.60

HLA-B

0.63

0.51

C7orf61

0.63

0.56

Top 10 negatively co-expressed genes

SLC24A5

-0.47

-0.50

CCDC73

-0.46

ANKRD12

-0.45

LARP1B

-0.44

-0.42

L3MBTL3

-0.44

-0.41

AGTPBP1

-0.44

-0.41

SCN3A

-0.44

-0.40

DNAJB7

-0.44

-0.45

RUFY2

-0.44

-0.42

DAAM1

-0.43

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
CACHD1	KIAA1573 \| RP4-655E10.1	cache domain containing 1	-	HPRD	12421765

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-132/212	2998	3004	1A	hsa-miR-212^SZ	UAACAGUCUCCAGUCACGGCC
miR-132/212	2998	3004	1A	hsa-miR-132^brain	UAACAGUCUACAGCCAUGGUCG
miR-137	172	178	1A	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-144	2996	3002	m8	hsa-miR-144	UACAGUAUAGAUGAUGUACUAG
miR-203.1	250	256	1A	hsa-miR-203	UGAAAUGUUUAGGACCACUAG
miR-216	3060	3066	1A	hsa-miR-216	UAAUCUCAGCUGGCAACUGUG
miR-219	360	367	1A,m8	hsa-miR-219^brain	UGAUUGUCCAAACGCAAUUCU
miR-25/32/92/363/367	3084	3090	1A	hsa-miR-25^brain	CAUUGCACUUGUCUCGGUCUGA
				hsa-miR-32	UAUUGCACAUUACUAAGUUGC
				hsa-miR-92	UAUUGCACUUGUCCCGGCCUG
				hsa-miR-367	AAUUGCACUUUAGCAAUGGUGA
				hsa-miR-92b^SZ	UAUUGCACUCGUCCCGGCCUC
miR-26	2893	2899	1A	hsa-miR-26a^brain	UUCAAGUAAUCCAGGAUAGGC
miR-26	2893	2899	1A	hsa-miR-26b^SZ	UUCAAGUAAUUCAGGAUAGGUU
miR-330	2902	2908	m8	hsa-miR-330^brain	GCAAAGCACACGGCCUGCAGAGA
miR-381	2906	2912	1A	hsa-miR-381	UAUACAAGGGCAAGCUCUCUGU
miR-381	2906	2912	1A	hsa-miR-381	UAUACAAGGGCAAGCUCUCUGU
miR-495	2979	2985	1A	hsa-miR-495^brain	AAACAAACAUGGUGCACUUCUUU
miR-495	2979	2985	1A	hsa-miR-495^brain	AAACAAACAUGGUGCACUUCUUU
miR-9	3094	3100	1A	hsa-miR-9^SZ	UCUUUGGUUAUCUAGCUGUAUGA
miR-9	3094	3100	1A	hsa-miR-9^SZ	UCUUUGGUUAUCUAGCUGUAUGA
miR-96	1925	1931	m8	hsa-miR-96^brain	UUUGGCACUAGCACAUUUUUGC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.