Gene Page

Gene Page: TMEM188

Summary

GeneID

255919

Symbol

TMEM188

Synonyms

C16orf69|DKFZp313D2416|FLJ38101

Description

transmembrane protein 188

Locus tag

Gene type

protein-coding

Map location

16q12.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

genome scan meta-analysis (European-ancestry samples)

Psr: 0.01775

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

membrane

IEA

integral to membrane

IEA

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-124/506	461	467	m8	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
				hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
				hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
				hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-137	1502	1508	1A	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-142-5p	1611	1618	1A,m8	hsa-miR-142-5p	CAUAAAGUAGAAAGCACUAC
miR-200bc/429	203	210	1A,m8	hsa-miR-200b	UAAUACUGCCUGGUAAUGAUGAC
				hsa-miR-200c	UAAUACUGCCGGGUAAUGAUGG
				hsa-miR-429	UAAUACUGUCUGGUAAAACCGU
miR-223	113	120	1A,m8	hsa-miR-223	UGUCAGUUUGUCAAAUACCCC
miR-25/32/92/363/367	127	134	1A,m8	hsa-miR-25^brain	CAUUGCACUUGUCUCGGUCUGA
				hsa-miR-32	UAUUGCACAUUACUAAGUUGC
				hsa-miR-92	UAUUGCACUUGUCCCGGCCUG
				hsa-miR-367	AAUUGCACUUUAGCAAUGGUGA
				hsa-miR-92b^SZ	UAUUGCACUCGUCCCGGCCUC
miR-410	1614	1620	1A	hsa-miR-410	AAUAUAACACAGAUGGCCUGU
miR-495	577	583	1A	hsa-miR-495^brain	AAACAAACAUGGUGCACUUCUUU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.