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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: USP21

Summary

GeneID

27005

Symbol

USP21

Synonyms

MGC3394|USP16|USP23

Description

ubiquitin specific peptidase 21

Locus tag

RP11-297K8.3

Gene type

protein-coding

Map location

1q22

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIA

genome scan meta-analysis (All samples)

Psr: 0.00814

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005515

protein binding

IPI

15231747

GO:0004221

ubiquitin thiolesterase activity

IEA

GO:0004221

ubiquitin thiolesterase activity

TAS

10786635

GO:0008234

cysteine-type peptidase activity

IEA

GO:0008233

peptidase activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006464

protein modification process

NAS

GO:0006511

ubiquitin-dependent protein catabolic process

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005575

cellular_component

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
let-7/98	63	69	1A	hsa-let-7a^brain	UGAGGUAGUAGGUUGUAUAGUU
				hsa-let-7b^brain	UGAGGUAGUAGGUUGUGUGGUU
				hsa-let-7c^brain	UGAGGUAGUAGGUUGUAUGGUU
				hsa-let-7d^brain	AGAGGUAGUAGGUUGCAUAGU
				hsa-let-7e^brain	UGAGGUAGGAGGUUGUAUAGU
				hsa-let-7f^brain	UGAGGUAGUAGAUUGUAUAGUU
				hsa-miR-98^brain	UGAGGUAGUAAGUUGUAUUGUU
				hsa-let-7g^SZ	UGAGGUAGUAGUUUGUACAGU
				hsa-let-7i^brain	UGAGGUAGUAGUUUGUGCUGU
miR-27	20	26	1A	hsa-miR-27a^brain	UUCACAGUGGCUAAGUUCCGC
miR-27	20	26	1A	hsa-miR-27b^brain	UUCACAGUGGCUAAGUUCUGC
miR-493-5p	188	195	1A,m8	hsa-miR-493-5p	UUGUACAUGGUAGGCUUUCAUU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.