Gene Page

Gene Page: TOX3

Summary

GeneID

27324

Symbol

TOX3

Synonyms

CAGF9|TNRC9

Description

TOX high mobility group box family member 3

See related

HGNC:11972|MIM:611416|

Locus tag

Gene type

protein-coding

Map location

16q12.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.01775

Literature

High-throughput literature-search

Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]

Click to show detail

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0003677

DNA binding

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006355

regulation of transcription, DNA-dependent

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0000785

chromatin

IEA

GO:0005634

nucleus

IEA

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-140	332	339	1A,m8	hsa-miR-140^brain	AGUGGUUUUACCCUAUGGUAG
miR-182	224	231	1A,m8	hsa-miR-182	UUUGGCAAUGGUAGAACUCACA
miR-199	672	678	m8	hsa-miR-199a	CCCAGUGUUCAGACUACCUGUUC
miR-199	672	678	m8	hsa-miR-199b	CCCAGUGUUUAGACUAUCUGUUC
miR-203.1	822	829	1A,m8	hsa-miR-203	UGAAAUGUUUAGGACCACUAG
miR-204/211	467	474	1A,m8	hsa-miR-204^brain	UUCCCUUUGUCAUCCUAUGCCU
miR-204/211	467	474	1A,m8	hsa-miR-211	UUCCCUUUGUCAUCCUUCGCCU
miR-218	108	114	m8	hsa-miR-218^brain	UUGUGCUUGAUCUAACCAUGU
miR-23	402	409	1A,m8	hsa-miR-23a^brain	AUCACAUUGCCAGGGAUUUCC
miR-23	402	409	1A,m8	hsa-miR-23b^brain	AUCACAUUGCCAGGGAUUACC
miR-323	402	408	1A	hsa-miR-323^brain	GCACAUUACACGGUCGACCUCU
miR-433-3p	193	199	1A	hsa-miR-433^brain	AUCAUGAUGGGCUCCUCGGUGU
miR-485-3p	160	166	m8	hsa-miR-485-3p	GUCAUACACGGCUCUCCUCUCU
miR-496	207	213	1A	hsa-miR-496	AUUACAUGGCCAAUCUC
miR-496	207	213	1A	hsa-miR-496	AUUACAUGGCCAAUCUC
miR-93.hd/291-3p/294/295/302/372/373/520	477	483	1A	hsa-miR-93^brain	AAAGUGCUGUUCGUGCAGGUAG
				hsa-miR-302a	UAAGUGCUUCCAUGUUUUGGUGA
				hsa-miR-302b	UAAGUGCUUCCAUGUUUUAGUAG
				hsa-miR-302c	UAAGUGCUUCCAUGUUUCAGUGG
				hsa-miR-302d	UAAGUGCUUCCAUGUUUGAGUGU
				hsa-miR-372	AAAGUGCUGCGACAUUUGAGCGU
				hsa-miR-373	GAAGUGCUUCGAUUUUGGGGUGU
				hsa-miR-520e	AAAGUGCUUCCUUUUUGAGGG
				hsa-miR-520a	AAAGUGCUUCCCUUUGGACUGU
				hsa-miR-520b	AAAGUGCUUCCUUUUAGAGGG
				hsa-miR-520c	AAAGUGCUUCCUUUUAGAGGGUU
				hsa-miR-520d	AAAGUGCUUCUCUUUGGUGGGUU
miR-96	225	231	1A	hsa-miR-96^brain	UUUGGCACUAGCACAUUUUUGC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.