Gene Page: PRPF19

Summary
GeneID  27339
Symbol  PRPF19
Synonyms  NMP200|PRP19|PSO4|SNEV|UBOX4|hPSO4
Description  PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)
See related  HGNC:17896|MIM:608330|Ensembl:ENSG00000110107|HPRD:12214|
Locus tag  -
Gene type  protein-coding
Map location  11q12.2
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 2 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
Top 10 negatively co-expressed genes
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0003677DNA bindingIEA-
GO:0005515protein bindingIPI17353931 
GO:0004842ubiquitin-protein ligase activityIDA11435423 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0048711positive regulation of astrocyte differentiationIEAastrocyte, Glial (GO term level: 12)-
GO:0045665negative regulation of neuron differentiationIEAneuron (GO term level: 10)-
GO:0000209protein polyubiquitinationIDA11435423 
GO:0001833inner cell mass cell proliferationIEA-
GO:0006397mRNA processingIEA-
GO:0008380RNA splicingIEA-
GO:0006281DNA repairIEA-
GO:0008610lipid biosynthetic processIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0000151ubiquitin ligase complexIEA-
GO:0005811lipid particleIEA-
GO:0005634nucleusIDA11435423 
GO:0005681spliceosomeIEA-
GO:0005737cytoplasmIDA11435423 
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
DNTTTDTdeoxynucleotidyltransferase, terminal-HPRD,BioGRID12960389 
EXOC72-5-3p | DKFZp686J04253 | EX070 | EXO70 | EXOC1 | Exo70p | FLJ40965 | FLJ46415 | YJL085Wexocyst complex component 7Two-hybridBioGRID16189514 
PLRG1MGC110980 | PRL1pleiotropic regulator 1 (PRL1 homolog, Arabidopsis)Affinity Capture-MSBioGRID17353931 
YWHAG14-3-3GAMMAtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide-HPRD15324660 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-14330371A,m8hsa-miR-143brainUGAGAUGAAGCACUGUAGCUCA
miR-203.11221281Ahsa-miR-203UGAAAUGUUUAGGACCACUAG
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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