Gene Page

Gene Page: C2orf55

Summary

GeneID

343990

Symbol

C2orf55

Synonyms

MGC42367

Description

chromosome 2 open reading frame 55

Locus tag

Gene type

protein-coding

Map location

2q11.2

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

genome scan meta-analysis

Psr: 0.0004

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-128	82	88	1A	hsa-miR-128a	UCACAGUGAACCGGUCUCUUUU
miR-128	82	88	1A	hsa-miR-128b	UCACAGUGAACCGGUCUCUUUC
miR-132/212	588	594	m8	hsa-miR-212^SZ	UAACAGUCUCCAGUCACGGCC
miR-132/212	588	594	m8	hsa-miR-132^brain	UAACAGUCUACAGCCAUGGUCG
miR-27	82	89	1A,m8	hsa-miR-27a^brain	UUCACAGUGGCUAAGUUCCGC
miR-27	82	89	1A,m8	hsa-miR-27b^brain	UUCACAGUGGCUAAGUUCUGC
miR-30-5p	452	458	m8	hsa-miR-30a-5p	UGUAAACAUCCUCGACUGGAAG
				hsa-miR-30c^brain	UGUAAACAUCCUACACUCUCAGC
				hsa-miR-30d^SZ	UGUAAACAUCCCCGACUGGAAG
				hsa-miR-30b^SZ	UGUAAACAUCCUACACUCAGCU
				hsa-miR-30e-5p	UGUAAACAUCCUUGACUGGA
miR-31	424	430	m8	hsa-miR-31	AGGCAAGAUGCUGGCAUAGCUG
miR-34/449	57	63	1A	hsa-miR-34a^brain	UGGCAGUGUCUUAGCUGGUUGUU
				hsa-miR-34c	AGGCAGUGUAGUUAGCUGAUUGC
				hsa-miR-449	UGGCAGUGUAUUGUUAGCUGGU
				hsa-miR-449b	AGGCAGUGUAUUGUUAGCUGGC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.