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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: ILF2

Summary

GeneID

3608

Symbol

ILF2

Synonyms

MGC8391|NF45|PRO3063

Description

interleukin enhancer binding factor 2, 45kDa

Locus tag

RP11-354A16.1

Gene type

protein-coding

Map location

1q21.3

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_I

genome scan meta-analysis

Psr: 0.0235

GSMA_IIA

genome scan meta-analysis (All samples)

Psr: 0.00814

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

PAN2

0.85

STARD9

0.85

0.87

NEK9

0.83

0.81

MYO9B

0.82

ACAD10

0.82

0.81

STAT2

0.81

0.84

PKD2

0.80

0.78

USP36

0.80

TRIM45

0.80

0.83

IKBKB

0.80

0.78

Top 10 negatively co-expressed genes

AF347015.21

-0.58

-0.64

AF347015.31

-0.57

IFI27

-0.56

-0.55

MT-CO2

-0.52

-0.53

AF347015.27

-0.52

C1orf54

-0.52

-0.57

HIGD1B

-0.52

VAMP5

-0.51

-0.55

METRN

-0.51

-0.53

GMFG

-0.51

-0.56

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0003677

DNA binding

IDA

7519613 |10574923

GO:0003702

RNA polymerase II transcription factor activity

TAS

7519613

GO:0003723

RNA binding

IEA

GO:0003725

double-stranded RNA binding

IDA

10574923

GO:0005515

protein binding

IPI

9442054 |10574923 |11739746

GO:0005524

ATP binding

IEA

GO:0016740

transferase activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006350

transcription

IEA

GO:0006955

immune response

IEA

GO:0045893

positive regulation of transcription, DNA-dependent

IDA

11739746

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005634

nucleus

IDA

7519613

GO:0005730

nucleolus

IDA

11790298

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
EEF1G	EF1G \| GIG35	eukaryotic translation elongation factor 1 gamma	Two-hybrid	BioGRID	16189514
EIF2AK2	EIF2AK1 \| MGC126524 \| PKR \| PRKR	eukaryotic translation initiation factor 2-alpha kinase 2	Biochemical Activity	BioGRID	11438540
ILF3	CBTF \| DRBF \| DRBP76 \| MMP4 \| MPHOSPH4 \| MPP4 \| NF-AT-90 \| NF110 \| NF90 \| NFAR \| NFAR-1 \| NFAR2 \| TCP110 \| TCP80	interleukin enhancer binding factor 3, 90kDa	-	HPRD,BioGRID	11739746
PRKDC	DNA-PKcs \| DNAPK \| DNPK1 \| HYRC \| HYRC1 \| XRCC7 \| p350	protein kinase, DNA-activated, catalytic polypeptide	-	HPRD,BioGRID	9442054
SFRS12	DKFZp564B176 \| MGC133045 \| SRrp508 \| SRrp86	splicing factor, arginine/serine-rich 12	-	HPRD	14559993

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-505	284	290	1A	hsa-miR-505	GUCAACACUUGCUGGUUUCCUC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.