Gene Page

Gene Page: ZC3H6

Summary

GeneID

376940

Symbol

ZC3H6

Synonyms

FLJ16526|FLJ41410|FLJ45877|KIAA2035|ZC3HDC6

Description

zinc finger CCCH-type containing 6

See related

HGNC:24762|HPRD:15698|

Locus tag

Gene type

protein-coding

Map location

2q13

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_I

genome scan meta-analysis

Psr: 0.0004

GSMA_IIA

genome scan meta-analysis (All samples)

Psr: 0.00755

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0003676

nucleic acid binding

IEA

GO:0008270

zinc ion binding

IEA

GO:0046872

metal ion binding

IEA

Pathway annotation

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-137	357	364	1A,m8	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-140	128	134	1A	hsa-miR-140^brain	AGUGGUUUUACCCUAUGGUAG
miR-15/16/195/424/497	114	120	1A	hsa-miR-15a^brain	UAGCAGCACAUAAUGGUUUGUG
				hsa-miR-16^brain	UAGCAGCACGUAAAUAUUGGCG
				hsa-miR-15b^brain	UAGCAGCACAUCAUGGUUUACA
				hsa-miR-195^SZ	UAGCAGCACAGAAAUAUUGGC
				hsa-miR-424	CAGCAGCAAUUCAUGUUUUGAA
				hsa-miR-497	CAGCAGCACACUGUGGUUUGU
miR-181	574	580	m8	hsa-miR-181a^brain	AACAUUCAACGCUGUCGGUGAGU
				hsa-miR-181b^SZ	AACAUUCAUUGCUGUCGGUGGG
				hsa-miR-181c^brain	AACAUUCAACCUGUCGGUGAGU
				hsa-miR-181d^brain	AACAUUCAUUGUUGUCGGUGGGUU
miR-200bc/429	388	394	m8	hsa-miR-200b	UAAUACUGCCUGGUAAUGAUGAC
				hsa-miR-200c	UAAUACUGCCGGGUAAUGAUGG
				hsa-miR-429	UAAUACUGUCUGGUAAAACCGU
miR-374	97	103	1A	hsa-miR-374	UUAUAAUACAACCUGAUAAGUG
miR-410	166	172	1A	hsa-miR-410	AAUAUAACACAGAUGGCCUGU
miR-433-3p	828	834	m8	hsa-miR-433^brain	AUCAUGAUGGGCUCCUCGGUGU
miR-433-3p	828	834	m8	hsa-miR-433^brain	AUCAUGAUGGGCUCCUCGGUGU
miR-503	114	120	1A	hsa-miR-503	UAGCAGCGGGAACAGUUCUGCAG
miR-539	2289	2295	1A	hsa-miR-539	GGAGAAAUUAUCCUUGGUGUGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.