Gene Page

Home
Datasets
Search
Analysis & Tools
Documents
About SZGR
Quick search: (e.g. 207 or AKT)

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

Release Site Map Support Contact us

Gene Page: ACCN1

Summary

GeneID

Symbol

ACCN1

Synonyms

Description

amiloride-sensitive cation channel 1, neuronal

Locus tag

Gene type

protein-coding

Map location

17q12

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GO_Annotation

Mapping neuro-related keywords to Gene Ontology annotations

Hits with neuro-related keywords: 2

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

GRM4

0.81

0.74

B3GALTL

0.79

0.65

NECAB2

0.78

0.58

RSPO4

0.77

0.45

PODNL1

0.77

0.56

DOK7

0.77

0.51

PCBP3

0.75

0.69

GRIN2D

0.74

0.64

KCND2

0.73

0.68

FZD9

0.73

0.46

Top 10 negatively co-expressed genes

EMX2

-0.27

-0.41

AF347015.2

-0.26

-0.28

ANP32C

-0.26

-0.34

AF347015.21

-0.25

-0.28

MT-ATP8

-0.24

-0.28

AF347015.8

-0.23

-0.26

AF347015.31

-0.23

-0.26

AF347015.18

-0.22

-0.27

AC100783.1

-0.22

-0.26

MT-CO2

-0.22

-0.26

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005515

protein binding

IPI

11802773

GO:0005216

ion channel activity

IEA

GO:0015280

amiloride-sensitive sodium channel activity

TAS

8626462

GO:0031402

sodium ion binding

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0007417

central nervous system development

TAS

Brain (GO term level: 6)

8626462

GO:0007268

synaptic transmission

TAS

neuron, Synap, Neurotransmitter (GO term level: 6)

8626462

GO:0007422

peripheral nervous system development

TAS

8626462

GO:0006814

sodium ion transport

IEA

GO:0006811

ion transport

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005886

plasma membrane

IEA

GO:0005887

integral to plasma membrane

TAS

8626462

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
ACCN2	ASIC \| ASIC1 \| ASIC1A \| BNaC2 \| hBNaC2	amiloride-sensitive cation channel 2, neuronal	-	HPRD	9360943
ACCN3	ASIC3 \| DRASIC \| SLNAC1 \| TNaC1	amiloride-sensitive cation channel 3	-	HPRD,BioGRID	10842183
PICK1	MGC15204 \| PICK \| PRKCABP	protein interacting with PRKCA 1	PICK1 interacts with BNC1a.	BIND	11802773
			-	HPRD	11739374
			PICK1 interacts with BNC1b.	BIND	11802773
STOML1	FLJ36370 \| SLP-1 \| STORP \| hUNC-24	stomatin (EPB72)-like 1	Affinity Capture-Western	BioGRID	15471860

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-133	380	386	m8	hsa-miR-133a	UUGGUCCCCUUCAACCAGCUGU
miR-133	380	386	m8	hsa-miR-133b	UUGGUCCCCUUCAACCAGCUA
miR-143	255	261	1A	hsa-miR-143^brain	UGAGAUGAAGCACUGUAGCUCA
miR-34/449	260	267	1A,m8	hsa-miR-34a^brain	UGGCAGUGUCUUAGCUGGUUGUU
				hsa-miR-34c	AGGCAGUGUAGUUAGCUGAUUGC
				hsa-miR-449	UGGCAGUGUAUUGUUAGCUGGU
				hsa-miR-449b	AGGCAGUGUAUUGUUAGCUGGC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.