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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: NAP1L3

Summary

GeneID

4675

Symbol

NAP1L3

Synonyms

MB20|MGC26312|NPL3

Description

nucleosome assembly protein 1-like 3

Locus tag

RP1-32F7.3

Gene type

protein-coding

Map location

Xq21.3-q22

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Literature

High-throughput literature-search

Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]

Click to show detail

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

NUDT22

0.90

0.85

TMEM141

0.89

PSMB10

0.89

0.80

COX8A

0.87

0.72

C2orf7

0.87

0.83

C6orf1

0.87

0.75

NDUFA2

0.87

0.76

SELM

0.86

0.78

AC040980.1

0.86

0.65

ISOC2

0.86

0.78

Top 10 negatively co-expressed genes

MAP4K4

-0.50

-0.67

ZNF326

-0.50

-0.65

ZC3H13

-0.50

-0.58

THOC2

-0.49

-0.68

AC005035.1

-0.49

-0.66

GIGYF2

-0.49

-0.54

USP34

-0.49

-0.58

MAP4K5

-0.48

-0.62

ZNF652

-0.48

-0.59

RBM25

-0.48

-0.64

Gene Ontology

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006334

nucleosome assembly

TAS

8976385

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005634

nucleus

IEA

GO:0005678

chromatin assembly complex

TAS

8976385

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-124/506	460	466	m8	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
miR-124/506	460	466	m8	hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-27	322	328	1A	hsa-miR-27a^brain	UUCACAGUGGCUAAGUUCCGC
miR-27	322	328	1A	hsa-miR-27b^brain	UUCACAGUGGCUAAGUUCUGC
miR-29	262	269	1A,m8	hsa-miR-29a^SZ	UAGCACCAUCUGAAAUCGGUU
				hsa-miR-29b^SZ	UAGCACCAUUUGAAAUCAGUGUU
				hsa-miR-29c^SZ	UAGCACCAUUUGAAAUCGGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.