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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: FXYD2

Summary

GeneID

486

Symbol

FXYD2

Synonyms

ATP1G1|HOMG2|MGC12372

Description

FXYD domain containing ion transport regulator 2

Locus tag

Gene type

protein-coding

Map location

11q23

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Association

A combined odds ratio method (Sun et al. 2008), association studies

Link to SZGene

GSMA_I

genome scan meta-analysis

Psr: 0.006

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

AL133445.2

0.86

0.22

CARD11

0.85

0.20

FAM20A

0.84

0.54

KBTBD10

0.80

0.38

AC079210.1

0.78

0.43

SUSD2

0.78

0.20

CASQ2

0.77

0.04

CHRNA3

0.76

0.17

NEXN

0.76

0.20

FAM19A4

0.76

0.11

Top 10 negatively co-expressed genes

CBR3

-0.19

-0.32

RLBP1

-0.18

-0.30

NNMT

-0.18

-0.33

PKIG

-0.18

-0.24

KRT17

-0.17

-0.28

SCG3

-0.17

-0.20

SERTAD1

-0.17

-0.28

AP000679.1

-0.17

-0.31

CXCL14

-0.17

-0.20

C1orf61

-0.17

-0.19

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005391

sodium:potassium-exchanging ATPase activity

TAS

9048881

GO:0005215

transporter activity

TAS

9048881

GO:0005216

ion channel activity

IEA

GO:0005216

ion channel activity

NAS

GO:0030955

potassium ion binding

IEA

GO:0031402

sodium ion binding

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006814

sodium ion transport

IEA

GO:0006811

ion transport

IEA

GO:0006811

ion transport

NAS

GO:0006813

potassium ion transport

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0016020

membrane

IEA

GO:0016021

integral to membrane

IEA

GO:0005890

sodium:potassium-exchanging ATPase complex

NAS

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-205	129	135	1A	hsa-miR-205	UCCUUCAUUCCACCGGAGUCUG

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.