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|
| GeneID |
487
|
| Symbol |
ATP2A1
|
| Synonyms |
ATP2A|SERCA1
|
| Description |
ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 |
| See related |
HGNC:811|MIM:108730|Ensembl:ENSG00000196296|HPRD:00157| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
16p12.1 |
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|
| Gene set name |
Method of gene set |
Evidence |
Info |
| GSMA_IIE | genome scan meta-analysis (European-ancestry samples) | Psr: 0.01775 | |
|
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| General Gene Expression (microarray) ? |
|
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| Gene Expression in Brain Regions (new) |
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| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| GPR158 | 0.93 | 0.77 | | |
| HOOK1 | 0.90 | 0.92 | | |
| RGS7BP | 0.90 | 0.89 | | |
| NCOA7 | 0.89 | 0.92 | | |
| SLMAP | 0.89 | 0.88 | | |
| CHM | 0.89 | 0.90 | | |
| SYNJ1 | 0.89 | 0.93 | | |
| PPP3CA | 0.89 | 0.88 | | |
| FAM179B | 0.89 | 0.87 | | |
| ATP2A2 | 0.88 | 0.91 | | |
Top 10 negatively co-expressed genes | | RAB34 | -0.46 | -0.57 | | |
| EFEMP2 | -0.46 | -0.50 | | |
| RAB13 | -0.46 | -0.59 | | |
| NME4 | -0.44 | -0.54 | | |
| BCL7C | -0.44 | -0.49 | | |
| DBI | -0.43 | -0.52 | | |
| RFXANK | -0.42 | -0.49 | | |
| AC006276.2 | -0.42 | -0.41 | | |
| IMPA2 | -0.41 | -0.53 | | |
| IRF7 | -0.41 | -0.54 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0000166 | nucleotide binding | IEA | | - |
| GO:0000287 | magnesium ion binding | IEA | | - |
| GO:0005509 | calcium ion binding | IMP | | 9405806 |
| GO:0005515 | protein binding | IPI | | 9295312 |
| GO:0005524 | ATP binding | IEA | | - |
| GO:0005388 | calcium-transporting ATPase activity | IDA | | 8729696 |
| GO:0005388 | calcium-transporting ATPase activity | IEA | | - |
| GO:0016787 | hydrolase activity | IEA | | - |
| GO:0016820 | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | IEA | | - |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0008152 | metabolic process | IEA | | - |
| GO:0006816 | calcium ion transport | IEA | | - |
| GO:0006816 | calcium ion transport | IMP | | 9405806 |
| GO:0006812 | cation transport | IEA | | - |
| GO:0006810 | transport | IEA | | - |
| GO:0006942 | regulation of striated muscle contraction | TAS | | 8841193 |
| GO:0015992 | proton transport | IEA | | - |
| GO:0031448 | positive regulation of fast-twitch skeletal muscle fiber contraction | IDA | | 12479237 |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0016020 | membrane | IEA | | - |
| GO:0016021 | integral to membrane | IEA | | - |
| GO:0016021 | integral to membrane | NAS | | 9405806 |
| GO:0033017 | sarcoplasmic reticulum membrane | IEA | | - |
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- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
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