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Gene Page: WDR42A

Summary

GeneID

50717

Symbol

WDR42A

Synonyms

DKFZp781G1096|FLJ35857|H326|MGC117276|MGC118891|MGC99640

Description

WD repeat domain 42A

Locus tag

Gene type

protein-coding

Map location

1q22-q23

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

genome scan meta-analysis

Psr: 0.0235

genome scan meta-analysis (All samples)

Psr: 0.00814

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Interactions

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
GTPBP3	FLJ14700 \| GTPBG3 \| MSS1 \| MTGP1 \| THDF1	GTP binding protein 3 (mitochondrial)	Two-hybrid	BioGRID	16189514
MDFI	I-MF \| I-mfa	MyoD family inhibitor	Two-hybrid	BioGRID	16189514

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-132/212	799	805	1A	hsa-miR-212^SZ	UAACAGUCUCCAGUCACGGCC
miR-132/212	799	805	1A	hsa-miR-132^brain	UAACAGUCUACAGCCAUGGUCG
miR-17-5p/20/93.mr/106/519.d	93	99	m8	hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAGU
				hsa-miR-20a^brain	UAAAGUGCUUAUAGUGCAGGUAG
				hsa-miR-106a	AAAAGUGCUUACAGUGCAGGUAGC
				hsa-miR-106b^SZ	UAAAGUGCUGACAGUGCAGAU
				hsa-miR-20b^SZ	CAAAGUGCUCAUAGUGCAGGUAG
				hsa-miR-519d	CAAAGUGCCUCCCUUUAGAGUGU
miR-186	322	328	1A	hsa-miR-186	CAAAGAAUUCUCCUUUUGGGCUU
miR-25/32/92/363/367	909	915	1A	hsa-miR-25^brain	CAUUGCACUUGUCUCGGUCUGA
				hsa-miR-32	UAUUGCACAUUACUAAGUUGC
				hsa-miR-92	UAUUGCACUUGUCCCGGCCUG
				hsa-miR-367	AAUUGCACUUUAGCAAUGGUGA
				hsa-miR-92b^SZ	UAUUGCACUCGUCCCGGCCUC
miR-409-3p	78	84	1A	hsa-miR-409-3p	CGAAUGUUGCUCGGUGAACCCCU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.