|
|
| GeneID |
5073
|
| Symbol |
PARN
|
| Synonyms |
DAN
|
| Description |
poly(A)-specific ribonuclease (deadenylation nuclease) |
| See related |
HGNC:8609|MIM:604212|HPRD:07250| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
16p13 |
|
| |
|
|
| Gene set name |
Method of gene set |
Evidence |
Info |
| GSMA_IIE | genome scan meta-analysis (European-ancestry samples) | Psr: 0.01775 | |
|
| |
| General Gene Expression (microarray) ? |
|
 |
| |
| Gene Expression in Brain Regions (new) |
|
| |
| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| ADAMTS1 | 0.69 | 0.65 | | |
| ICAM1 | 0.68 | 0.58 | | |
| APOLD1 | 0.66 | 0.46 | | |
| LRRC32 | 0.65 | 0.49 | | |
| EFEMP1 | 0.65 | 0.60 | | |
| FOXF1 | 0.65 | 0.55 | | |
| SDC4 | 0.65 | 0.59 | | |
| AC087645.1 | 0.65 | 0.59 | | |
| TPCN1 | 0.64 | 0.51 | | |
| ACOT11 | 0.63 | 0.56 | | |
Top 10 negatively co-expressed genes | | ASNSD1 | -0.40 | -0.53 | | |
| ATXN10 | -0.40 | -0.50 | | |
| UBE2E3 | -0.39 | -0.51 | | |
| TUBB2A | -0.39 | -0.54 | | |
| PODXL2 | -0.39 | -0.54 | | |
| MLLT11 | -0.39 | -0.52 | | |
| FXYD6 | -0.39 | -0.50 | | |
| PURG | -0.39 | -0.51 | | |
| SMAP1 | -0.39 | -0.53 | | |
| SPATS2 | -0.39 | -0.50 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0000166 | nucleotide binding | IEA | | - |
| GO:0000287 | magnesium ion binding | IEA | | - |
| GO:0003723 | RNA binding | IEA | | - |
| GO:0003730 | mRNA 3'-UTR binding | TAS | | 9736620 |
| GO:0005515 | protein binding | IPI | | 15231747 |
| GO:0004535 | poly(A)-specific ribonuclease activity | IEA | | - |
| GO:0004527 | exonuclease activity | IEA | | - |
| GO:0016787 | hydrolase activity | IEA | | - |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEA | | - |
| GO:0007292 | female gamete generation | TAS | | 9736620 |
| GO:0009451 | RNA modification | TAS | | 9736620 |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005634 | nucleus | TAS | | 9736620 |
| GO:0005737 | cytoplasm | TAS | | 9736620 |
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