| ATG16L1 | APG16L | ATG16L | FLJ00045 | FLJ10035 | FLJ10828 | FLJ22677 | IBD10 | WDR30 | ATG16 autophagy related 16-like 1 (S. cerevisiae) | - | HPRD,BioGRID | 14743216 |
| BCL10 | CARMEN | CIPER | CLAP | c-E10 | mE10 | B-cell CLL/lymphoma 10 | Bcl10 interacts with NEMO. | BIND | 14695475 |
| CARD8 | CARDINAL | DACAR | DKFZp779L0366 | Dakar | FLJ18119 | FLJ18121 | KIAA0955 | MGC57162 | NDPP | NDPP1 | TUCAN | caspase recruitment domain family, member 8 | - | HPRD,BioGRID | 11551959 |
| CCAR1 | CARP-1 | CARP1 | MGC44628 | RP11-437A18.1 | cell division cycle and apoptosis regulator 1 | - | HPRD | 14743216 |
| CDC37 | P50CDC37 | cell division cycle 37 homolog (S. cerevisiae) | - | HPRD,BioGRID | 11864612 |
| CHUK | IKBKA | IKK-alpha | IKK1 | IKKA | NFKBIKA | TCF16 | conserved helix-loop-helix ubiquitous kinase | Affinity Capture-Western in vitro in vivo Reconstituted Complex Two-hybrid | BioGRID | 10968790 |11864612 |11877453 |
| - | HPRD | 10968790 |12133833
|
| COPS3 | SGN3 | COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis) | - | HPRD,BioGRID | 11418127 |
| CSE1L | CAS | CSE1 | MGC117283 | MGC130036 | MGC130037 | XPO2 | CSE1 chromosome segregation 1-like (yeast) | - | HPRD | 14743216 |
| CYLD | CDMT | CYLD1 | CYLDI | EAC | FLJ20180 | FLJ31664 | FLJ78684 | HSPC057 | KIAA0849 | MFT | MFT1 | SBS | TEM | USPL2 | cylindromatosis (turban tumor syndrome) | CYLD interacts with NEMO. | BIND | 12917691 |
| DBN1 | D0S117E | DKFZp434D064 | drebrin 1 | - | HPRD | 14743216 |
| DDB1 | DDBA | UV-DDB1 | XAP1 | XPCE | XPE | XPE-BF | damage-specific DNA binding protein 1, 127kDa | - | HPRD | 14743216 |
| F7 | - | coagulation factor VII (serum prothrombin conversion accelerator) | - | HPRD | 14743216 |
| FAM62A | KIAA0747 | MBC2 | family with sequence similarity 62 (C2 domain containing), member A | - | HPRD | 14743216 |
| GCN1L1 | GCN1 | GCN1L | KIAA0219 | GCN1 general control of amino-acid synthesis 1-like 1 (yeast) | - | HPRD | 14743216 |
| HSP90AA1 | FLJ31884 | HSP86 | HSP89A | HSP90A | HSP90N | HSPC1 | HSPCA | HSPCAL1 | HSPCAL4 | HSPN | Hsp89 | Hsp90 | LAP2 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | - | HPRD | 11864612 |
| HSP90AA2 | HSP90ALPHA | HSPCA | HSPCAL3 | heat shock protein 90kDa alpha (cytosolic), class A member 2 | Affinity Capture-MS | BioGRID | 14743216 |
| HSPA1A | FLJ54303 | FLJ54370 | FLJ54392 | FLJ54408 | FLJ75127 | HSP70-1 | HSP70-1A | HSP70I | HSP72 | HSPA1 | HSPA1B | heat shock 70kDa protein 1A | Reconstituted Complex | BioGRID | 11877453 |
| HSPA8 | HSC54 | HSC70 | HSC71 | HSP71 | HSP73 | HSPA10 | LAP1 | MGC131511 | MGC29929 | NIP71 | heat shock 70kDa protein 8 | - | HPRD | 14743216 |
| IGHG3 | DKFZp686H11213 | FLJ39988 | FLJ40036 | FLJ40253 | FLJ40587 | FLJ40789 | FLJ40834 | IgG3 | MGC45809 | immunoglobulin heavy constant gamma 3 (G3m marker) | - | HPRD | 14743216 |
| IKBKB | FLJ40509 | IKK-beta | IKK2 | IKKB | MGC131801 | NFKBIKB | inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta | - | HPRD,BioGRID | 10968790 |
| NEMO interacts with IKK-beta. | BIND | 15802604 |
| IKBKG | AMCBX1 | FIP-3 | FIP3 | Fip3p | IKK-gamma | IP | IP1 | IP2 | IPD2 | NEMO | inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma | IKK-gamma can homo-dimerize and homo-trimerize. | BIND | 12435599 |
| IPO9 | DKFZp761M1547 | FLJ10402 | Imp9 | importin 9 | - | HPRD | 14743216 |
| IRS1 | HIRS-1 | insulin receptor substrate 1 | - | HPRD | 12351658 |
| KIAA0368 | ECM29 | FLJ22036 | KIAA1962 | RP11-386D8.2 | KIAA0368 | - | HPRD | 14743216 |
| MAP3K14 | FTDCR1B | HS | HSNIK | NIK | mitogen-activated protein kinase kinase kinase 14 | - | HPRD,BioGRID | 9927690 |
| MAP3K7IP3 | MGC45404 | NAP1 | TAB3 | mitogen-activated protein kinase kinase kinase 7 interacting protein 3 | TAB3 interacts with NEMO. | BIND | 15327770 |
| MCM7 | CDABP0042 | CDC47 | MCM2 | P1.1-MCM3 | P1CDC47 | P85MCM | PNAS-146 | minichromosome maintenance complex component 7 | - | HPRD | 14743216 |
| MRCL3 | MLCB | MRLC3 | myosin regulatory light chain MRCL3 | - | HPRD | 14743216 |
| MYL6 | ESMLC | LC17-GI | LC17-NM | LC17A | LC17B | MLC1SM | MLC3NM | MLC3SM | myosin, light chain 6, alkali, smooth muscle and non-muscle | - | HPRD | 14743216 |
| NCOA3 | ACTR | AIB-1 | AIB1 | CAGH16 | CTG26 | KAT13B | MGC141848 | RAC3 | SRC3 | TNRC14 | TNRC16 | TRAM-1 | pCIP | nuclear receptor coactivator 3 | Affinity Capture-MS Affinity Capture-Western Co-fractionation Reconstituted Complex | BioGRID | 11971985 |
| NFKB1 | DKFZp686C01211 | EBP-1 | KBF1 | MGC54151 | NF-kappa-B | NFKB-p105 | NFKB-p50 | p105 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 | Affinity Capture-MS | BioGRID | 14743216 |
| NFKB2 | LYT-10 | LYT10 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) | Affinity Capture-MS | BioGRID | 14743216 |
| PPM1B | MGC21657 | PP2C-beta-X | PP2CB | PP2CBETA | PPC2BETAX | protein phosphatase 1B (formerly 2C), magnesium-dependent, beta isoform | - | HPRD,BioGRID | 14585847 |
| PPP1CB | MGC3672 | PP-1B | PPP1CD | protein phosphatase 1, catalytic subunit, beta isoform | - | HPRD | 14743216 |
| PRKCQ | MGC126514 | MGC141919 | PRKCT | nPKC-theta | protein kinase C, theta | PKC-theta interacts with NEMO. | BIND | 15802604 |
| RAB11B | H-YPT3 | MGC133246 | RAB11B, member RAS oncogene family | - | HPRD,BioGRID | 11495908 |
| RIPK1 | FLJ39204 | RIP | RIP1 | receptor (TNFRSF)-interacting serine-threonine kinase 1 | - | HPRD,BioGRID | 10880512 |
| RIPK2 | CARD3 | CARDIAK | CCK | GIG30 | RICK | RIP2 | receptor-interacting serine-threonine kinase 2 | - | HPRD,BioGRID | 10880512 |
| RPS27L | - | ribosomal protein S27-like | - | HPRD | 14743216 |
| RPS3 | FLJ26283 | FLJ27450 | MGC87870 | ribosomal protein S3 | - | HPRD | 14743216 |
| SFXN1 | FLJ12876 | sideroflexin 1 | - | HPRD | 14743216 |
| TANK | I-TRAF | TRAF2 | TRAF family member-associated NFKB activator | - | HPRD,BioGRID | 12133833 |
| IKK-gamma interacts with TANK. | BIND | 12133833 |
| TBK1 | FLJ11330 | NAK | T2K | TANK-binding kinase 1 | Affinity Capture-MS | BioGRID | 14743216 |
| TNFAIP3 | A20 | MGC104522 | MGC138687 | MGC138688 | OTUD7C | TNFA1P2 | tumor necrosis factor, alpha-induced protein 3 | - | HPRD,BioGRID | 10755617 |
| TNFRSF1A | CD120a | FPF | MGC19588 | TBP1 | TNF-R | TNF-R-I | TNF-R55 | TNFAR | TNFR1 | TNFR55 | TNFR60 | p55 | p55-R | p60 | tumor necrosis factor receptor superfamily, member 1A | - | HPRD,BioGRID | 10755617 |
| TNIP2 | ABIN-2 | ABIN2 | FLIP1 | KLIP | MGC4289 | TNFAIP3 interacting protein 2 | - | HPRD | 14653779 |
| TRAF3IP2 | ACT1 | C6orf2 | C6orf4 | C6orf5 | C6orf6 | CIKS | DKFZp586G0522 | MGC3581 | TRAF3 interacting protein 2 | An unspecified isoform of CIKS interacts with IKK-gamma. This interaction was modeled on a demonstrated interaction between CIKS from an unspecified species and mouse IKK-gamma. | BIND | 12133833 |
| NEMO interacts with CIKS. This interaction was modeled on a demonstrated interaction between mouse NEMO and human CIKS. | BIND | 12133833 |
| - | HPRD,BioGRID | 10962024 |10962033
|
| TRPC4AP | C20orf188 | TRRP4AP | TRUSS | transient receptor potential cation channel, subfamily C, member 4 associated protein | Affinity Capture-Western | BioGRID | 14585990 |
| TUBA3C | TUBA2 | bA408E5.3 | tubulin, alpha 3c | - | HPRD | 14743216 |
| TUBA4B | FLJ13940 | TUBA4 | tubulin, alpha 4b (pseudogene) | - | HPRD | 14743216 |
| UBB | FLJ25987 | MGC8385 | ubiquitin B | Ub ubiquitinates NEMO. | BIND | 14695475 |
| VARS | G7A | VARS1 | VARS2 | valyl-tRNA synthetase | - | HPRD | 14743216 |
| ZFAND5 | ZA20D2 | ZFAND5A | ZNF216 | zinc finger, AN1-type domain 5 | - | HPRD,BioGRID | 14754897 |
| ZNF216 interacts with IKK-gamma. | BIND | 14754897 |