Gene Page

Gene Page: SIDT2

Summary

GeneID

51092

Symbol

SIDT2

Synonyms

CGI-40|DKFZp686L17253|FLJ90656

Description

SID1 transmembrane family, member 2

Locus tag

Gene type

protein-coding

Map location

11q23.3

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

genome scan meta-analysis

Psr: 0.006

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

membrane

IEA

integral to membrane

IEA

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-15/16/195/424/497	242	248	m8	hsa-miR-15a^brain	UAGCAGCACAUAAUGGUUUGUG
				hsa-miR-16^brain	UAGCAGCACGUAAAUAUUGGCG
				hsa-miR-15b^brain	UAGCAGCACAUCAUGGUUUACA
				hsa-miR-195^SZ	UAGCAGCACAGAAAUAUUGGC
				hsa-miR-424	CAGCAGCAAUUCAUGUUUUGAA
				hsa-miR-497	CAGCAGCACACUGUGGUUUGU
miR-183	843	849	m8	hsa-miR-183	UAUGGCACUGGUAGAAUUCACUG
miR-185	292	298	1A	hsa-miR-185^brain	UGGAGAGAAAGGCAGUUC
miR-29	580	587	1A,m8	hsa-miR-29a^SZ	UAGCACCAUCUGAAAUCGGUU
				hsa-miR-29b^SZ	UAGCACCAUUUGAAAUCAGUGUU
				hsa-miR-29c^SZ	UAGCACCAUUUGAAAUCGGU
miR-34/449	506	512	m8	hsa-miR-34a^brain	UGGCAGUGUCUUAGCUGGUUGUU
				hsa-miR-34c	AGGCAGUGUAGUUAGCUGAUUGC
				hsa-miR-449	UGGCAGUGUAUUGUUAGCUGGU
				hsa-miR-449b	AGGCAGUGUAUUGUUAGCUGGC
miR-376	1338	1345	1A,m8	hsa-miR-376a	AUCAUAGAGGAAAAUCCACGU
miR-376	1338	1345	1A,m8	hsa-miR-376b	AUCAUAGAGGAAAAUCCAUGUU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.