Gene Page: ATP6V1A

Summary
GeneID  523
Symbol  ATP6V1A
Synonyms  ATP6A1|ATP6V1A1|HO68|VA68|VPP2|Vma1
Description  ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
See related  HGNC:851|MIM:607027|Ensembl:ENSG00000114573|HPRD:06120|
Locus tag  -
Gene type  protein-coding
Map location  3q13.2-q13.31
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_IIEgenome scan meta-analysis (European-ancestry samples)Psr: 0.04359 
GSMA_IIAgenome scan meta-analysis (All samples)Psr: 0.04047 
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]Click to show detail
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
ATP6V0A10.960.96
NSF0.950.94
PREPL0.930.93
MAPK90.930.95
GABRG20.930.93
SYNJ10.920.92
GLS0.920.95
MAP2K40.920.94
ARL8B0.920.92
RTN30.920.93
Top 10 negatively co-expressed genes
RAB34-0.47-0.53
EFEMP2-0.47-0.51
RAB13-0.46-0.55
IRF7-0.45-0.56
BCL7C-0.43-0.48
C1orf61-0.42-0.51
NME4-0.41-0.53
CLEC3B-0.41-0.49
EMX2-0.41-0.56
NSBP1-0.40-0.45
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0000166nucleotide bindingIEA-
GO:0005524ATP bindingIEA-
GO:0016787hydrolase activityIEA-
GO:0046933hydrogen ion transporting ATP synthase activity, rotational mechanismIEA-
GO:0046872metal ion bindingIEA-
GO:0046961hydrogen ion transporting ATPase activity, rotational mechanismIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006811ion transportIEA-
GO:0006754ATP biosynthetic processIEA-
GO:0015992proton transportIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005739mitochondrionIEA-
GO:0005887integral to plasma membraneTAS8463241 
GO:0016469proton-transporting two-sector ATPase complexTAS8463241 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-1/206172178m8hsa-miR-1UGGAAUGUAAAGAAGUAUGUA
hsa-miR-206SZUGGAAUGUAAGGAAGUGUGUGG
hsa-miR-613AGGAAUGUUCCUUCUUUGCC
miR-12818241Ahsa-miR-128aUCACAGUGAACCGGUCUCUUUU
hsa-miR-128bUCACAGUGAACCGGUCUCUUUC
miR-138211321191Ahsa-miR-138brainAGCUGGUGUUGUGAAUC
miR-141/200a24602466m8hsa-miR-141UAACACUGUCUGGUAAAGAUGG
hsa-miR-200aUAACACUGUCUGGUAACGAUGU
miR-14372791A,m8hsa-miR-143brainUGAGAUGAAGCACUGUAGCUCA
miR-21723862392m8hsa-miR-217UACUGCAUCAGGAACUGAUUGGAU
miR-271824m8hsa-miR-27abrainUUCACAGUGGCUAAGUUCCGC
hsa-miR-27bbrainUUCACAGUGGCUAAGUUCUGC
miR-320102108m8hsa-miR-320AAAAGCUGGGUUGAGAGGGCGAA
miR-53967741A,m8hsa-miR-539GGAGAAAUUAUCCUUGGUGUGU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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