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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: PGM1

Summary

GeneID

5236

Symbol

PGM1

Synonyms

Description

phosphoglucomutase 1

Locus tag

Gene type

protein-coding

Map location

1p31

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIA

genome scan meta-analysis (All samples)

Psr: 0.02692

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0000287

magnesium ion binding

IEA

GO:0004614

phosphoglucomutase activity

EXP

7902568

GO:0004614

phosphoglucomutase activity

IDA

1530890

GO:0016853

isomerase activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006006

glucose metabolic process

NAS

1530890

GO:0005975

carbohydrate metabolic process

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005829

cytosol

EXP

7902568

GO:0005737

cytoplasm

NAS

1530890

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
S100A1	S100 \| S100-alpha \| S100A	S100 calcium binding protein A1	Affinity Capture-Western Far Western	BioGRID	8894274
S100B	NEF \| S100 \| S100beta	S100 calcium binding protein B	Affinity Capture-Western Far Western	BioGRID	8894274

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-124/506	445	451	m8	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
miR-124/506	445	451	m8	hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-30-5p	411	418	1A,m8	hsa-miR-30a-5p	UGUAAACAUCCUCGACUGGAAG
				hsa-miR-30c^brain	UGUAAACAUCCUACACUCUCAGC
				hsa-miR-30d^SZ	UGUAAACAUCCCCGACUGGAAG
				hsa-miR-30b^SZ	UGUAAACAUCCUACACUCAGCU
				hsa-miR-30e-5p	UGUAAACAUCCUUGACUGGA
miR-34/449	150	157	1A,m8	hsa-miR-34a^brain	UGGCAGUGUCUUAGCUGGUUGUU
				hsa-miR-34c	AGGCAGUGUAGUUAGCUGAUUGC
				hsa-miR-449	UGGCAGUGUAUUGUUAGCUGGU
				hsa-miR-449b	AGGCAGUGUAUUGUUAGCUGGC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.