Gene Page

Home
Datasets
Search
Analysis & Tools
Documents
About SZGR
Quick search: (e.g. 207 or AKT)

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

Release Site Map Support Contact us

Gene Page: RHBDL2

Summary

GeneID

54933

Symbol

RHBDL2

Synonyms

MGC16997|RRP2

Description

rhomboid, veinlet-like 2 (Drosophila)

Locus tag

Gene type

protein-coding

Map location

1p34.3

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GO_Annotation

Mapping neuro-related keywords to Gene Ontology annotations

Hits with neuro-related keywords: 1

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

PSEN2

0.89

ACOT7

0.89

PPP2R5B

0.87

ATP13A2

0.87

0.88

SYNGR3

0.86

0.89

SYT3

0.86

0.88

ATP1A3

0.85

0.88

STMN3

0.84

0.86

CHPF

0.84

0.87

SEZ6L2

0.84

0.90

Top 10 negatively co-expressed genes

AF347015.21

-0.53

-0.46

AF347015.2

-0.53

-0.43

AF347015.8

-0.53

-0.45

MT-CO2

-0.52

-0.45

AP002478.3

-0.52

-0.54

AF347015.33

-0.52

-0.44

AF347015.31

-0.51

-0.44

AC098691.2

-0.50

-0.51

NOSTRIN

-0.50

-0.46

AF347015.26

-0.50

-0.41

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0004252

serine-type endopeptidase activity

IEA

glutamate (GO term level: 7)

GO:0008233

peptidase activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0007165

signal transduction

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0016020

membrane

IEA

GO:0016021

integral to membrane

IEA

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
EFNB2	EPLG5 \| HTKL \| Htk-L \| LERK5 \| MGC126226 \| MGC126227 \| MGC126228	ephrin-B2	-	HPRD	15047175
EFNB3	EFL6 \| EPLG8 \| LERK8	ephrin-B3	-	HPRD,BioGRID	15047175

Pathway annotation

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-361	672	678	1A	hsa-miR-361^brain	UUAUCAGAAUCUCCAGGGGUAC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.