Gene Page

Gene Page: C11orf57

Summary

GeneID

55216

Symbol

C11orf57

Synonyms

FLJ10726

Description

chromosome 11 open reading frame 57

Locus tag

Gene type

protein-coding

Map location

11q23.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

genome scan meta-analysis

Psr: 0.006

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
let-7/98	1574	1580	m8	hsa-let-7a^brain	UGAGGUAGUAGGUUGUAUAGUU
				hsa-let-7b^brain	UGAGGUAGUAGGUUGUGUGGUU
				hsa-let-7c^brain	UGAGGUAGUAGGUUGUAUGGUU
				hsa-let-7d^brain	AGAGGUAGUAGGUUGCAUAGU
				hsa-let-7e^brain	UGAGGUAGGAGGUUGUAUAGU
				hsa-let-7f^brain	UGAGGUAGUAGAUUGUAUAGUU
				hsa-miR-98^brain	UGAGGUAGUAAGUUGUAUUGUU
				hsa-let-7g^SZ	UGAGGUAGUAGUUUGUACAGU
				hsa-let-7i^brain	UGAGGUAGUAGUUUGUGCUGU
miR-125/351	921	928	1A,m8	hsa-miR-125b^brain	UCCCUGAGACCCUAACUUGUGA
miR-125/351	921	928	1A,m8	hsa-miR-125a^brain	UCCCUGAGACCCUUUAACCUGUG
miR-128	1001	1007	1A	hsa-miR-128a	UCACAGUGAACCGGUCUCUUUU
miR-128	1001	1007	1A	hsa-miR-128b	UCACAGUGAACCGGUCUCUUUC
miR-137	1874	1881	1A,m8	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-138	1290	1297	1A,m8	hsa-miR-138^brain	AGCUGGUGUUGUGAAUC
miR-144	999	1005	m8	hsa-miR-144	UACAGUAUAGAUGAUGUACUAG
miR-196	1573	1579	m8	hsa-miR-196a	UAGGUAGUUUCAUGUUGUUGG
miR-196	1573	1579	m8	hsa-miR-196b	UAGGUAGUUUCCUGUUGUUGG
miR-214	611	617	m8	hsa-miR-214^brain	ACAGCAGGCACAGACAGGCAG
miR-27	1001	1007	m8	hsa-miR-27a^brain	UUCACAGUGGCUAAGUUCCGC
miR-27	1001	1007	m8	hsa-miR-27b^brain	UUCACAGUGGCUAAGUUCUGC
miR-29	466	472	m8	hsa-miR-29a^SZ	UAGCACCAUCUGAAAUCGGUU
				hsa-miR-29b^SZ	UAGCACCAUUUGAAAUCAGUGUU
				hsa-miR-29c^SZ	UAGCACCAUUUGAAAUCGGU
miR-330	469	476	1A,m8	hsa-miR-330^brain	GCAAAGCACACGGCCUGCAGAGA

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.