Gene Page: C2orf29

Summary
GeneID  55571
Symbol  C2orf29
Synonyms  C40
Description  chromosome 2 open reading frame 29
See related  HGNC:25217|Ensembl:ENSG00000158435|HPRD:12812|
Locus tag  -
Gene type  protein-coding
Map location  2q11.2
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.0004 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
CSTF30.870.88
THUMPD30.860.87
AC104117.10.860.85
ZNF140.860.86
NAE10.860.88
CAPN70.860.87
TRMT50.860.86
ZNF1800.850.87
DDX520.850.87
NUP540.850.87
Top 10 negatively co-expressed genes
MT-CO2-0.69-0.78
AF347015.27-0.68-0.76
MT-CYB-0.68-0.78
AF347015.31-0.68-0.77
HLA-F-0.68-0.72
AF347015.8-0.67-0.79
AF347015.33-0.67-0.77
AF347015.15-0.66-0.77
AF347015.2-0.65-0.77
AIFM3-0.63-0.68
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0003674molecular_functionND10497265 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0008283cell proliferationNAS10497265 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005575cellular_componentND10497265 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
let-7/98171Ahsa-let-7abrainUGAGGUAGUAGGUUGUAUAGUU
hsa-let-7bbrainUGAGGUAGUAGGUUGUGUGGUU
hsa-let-7cbrainUGAGGUAGUAGGUUGUAUGGUU
hsa-let-7dbrainAGAGGUAGUAGGUUGCAUAGU
hsa-let-7ebrainUGAGGUAGGAGGUUGUAUAGU
hsa-let-7fbrainUGAGGUAGUAGAUUGUAUAGUU
hsa-miR-98brainUGAGGUAGUAAGUUGUAUUGUU
hsa-let-7gSZUGAGGUAGUAGUUUGUACAGU
hsa-let-7ibrainUGAGGUAGUAGUUUGUGCUGU
miR-124/506869875m8hsa-miR-506UAAGGCACCCUUCUGAGUAGA
hsa-miR-124brainUAAGGCACGCGGUGAAUGCC
miR-142-5p109115m8hsa-miR-142-5pCAUAAAGUAGAAAGCACUAC
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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