Gene Page: TBC1D22B

Summary
GeneID  55633
Symbol  TBC1D22B
Synonyms  C6orf197|DKFZp762J0110|FLJ20337|MGC125626|MGC125627|RP4-744I24.2|dJ744I24.2
Description  TBC1 domain family, member 22B
See related  HGNC:21602|Ensembl:ENSG00000065491|HPRD:15475|
Locus tag  -
Gene type  protein-coding
Map location  6p21.2
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.033 
GSMA_IIEgenome scan meta-analysis (European-ancestry samples)Psr: 0.04433 
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]Click to show detail
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
CEP780.930.90
SENP70.920.91
SMC30.910.89
C14orf1350.910.89
SMC60.910.89
C2orf670.910.91
PPP4R10.910.89
ZNF5590.910.88
IFT810.910.89
STX20.910.86
Top 10 negatively co-expressed genes
HLA-F-0.70-0.73
AF347015.31-0.69-0.83
MT-CO2-0.68-0.84
FBXO2-0.68-0.67
AF347015.27-0.68-0.80
PTH1R-0.68-0.72
AIFM3-0.67-0.71
AF347015.33-0.67-0.81
MT-CYB-0.66-0.82
C5orf53-0.66-0.67
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005097Rab GTPase activator activityIEA-
GO:0005096GTPase activator activityIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0032313regulation of Rab GTPase activityIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005622intracellularIEA-
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-1285460m8hsa-miR-128aUCACAGUGAACCGGUCUCUUUU
hsa-miR-128bUCACAGUGAACCGGUCUCUUUC
miR-149476482m8hsa-miR-149brainUCUGGCUCCGUGUCUUCACUCC
miR-1502232291Ahsa-miR-150UCUCCCAACCCUUGUACCAGUG
miR-200bc/429190196m8hsa-miR-200bUAAUACUGCCUGGUAAUGAUGAC
hsa-miR-200cUAAUACUGCCGGGUAAUGAUGG
hsa-miR-429UAAUACUGUCUGGUAAAACCGU
miR-2081311371Ahsa-miR-208AUAAGACGAGCAAAAAGCUUGU
miR-244744811A,m8hsa-miR-24SZUGGCUCAGUUCAGCAGGAACAG
miR-493-5p8478541A,m8hsa-miR-493-5pUUGUACAUGGUAGGCUUUCAUU
miR-4991311371Ahsa-miR-499UUAAGACUUGCAGUGAUGUUUAA
miR-539157515811Ahsa-miR-539GGAGAAAUUAUCCUUGGUGUGU
miR-9612911297m8hsa-miR-96brainUUUGGCACUAGCACAUUUUUGC
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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