Gene Page

Gene Page: C17orf63

Summary

GeneID

55731

Symbol

C17orf63

Synonyms

FLJ10700

Description

chromosome 17 open reading frame 63

Locus tag

Gene type

protein-coding

Map location

17q11.2

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Expression

P value: 2.298

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

AATK

0.85

0.78

BHLHE41

0.83

0.69

ENDOD1

0.83

0.78

LGI3

0.82

0.73

S1PR5

0.80

0.67

GLDN

0.80

0.72

GPR62

0.80

0.75

TMEM151A

0.80

0.81

DYSF

0.80

0.73

VWA1

0.79

0.71

Top 10 negatively co-expressed genes

EXOSC8

-0.45

-0.47

C9orf46

-0.44

-0.51

SNHG12

-0.43

-0.53

RBMX2

-0.43

-0.47

GTF3C6

-0.42

-0.46

RP9P

-0.42

-0.53

FAM36A

-0.42

-0.45

AIM2

-0.39

-0.41

HMGN1

-0.39

-0.38

SNRPG

-0.39

-0.50

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-101	1985	1991	m8	hsa-miR-101	UACAGUACUGUGAUAACUGAAG
miR-124.1	1508	1514	m8	hsa-miR-124a	UUAAGGCACGCGGUGAAUGCCA
miR-124.1	1508	1514	m8	hsa-miR-124a	UUAAGGCACGCGGUGAAUGCCA
miR-124/506	1508	1514	1A	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
miR-124/506	1508	1514	1A	hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-128	1987	1993	1A	hsa-miR-128a	UCACAGUGAACCGGUCUCUUUU
miR-128	1987	1993	1A	hsa-miR-128b	UCACAGUGAACCGGUCUCUUUC
miR-129-5p	880	886	1A	hsa-miR-129^brain	CUUUUUGCGGUCUGGGCUUGC
miR-129-5p	880	886	1A	hsa-miR-129-5p	CUUUUUGCGGUCUGGGCUUGCU
miR-137	1463	1469	m8	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-137	1463	1469	m8	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-149	1439	1445	1A	hsa-miR-149^brain	UCUGGCUCCGUGUCUUCACUCC
miR-182	1558	1564	1A	hsa-miR-182	UUUGGCAAUGGUAGAACUCACA
miR-199	911	917	m8	hsa-miR-199a	CCCAGUGUUCAGACUACCUGUUC
miR-199	911	917	m8	hsa-miR-199b	CCCAGUGUUUAGACUAUCUGUUC
miR-204/211	122	129	1A,m8	hsa-miR-204^brain	UUCCCUUUGUCAUCCUAUGCCU
miR-204/211	122	129	1A,m8	hsa-miR-211	UUCCCUUUGUCAUCCUUCGCCU
miR-23	1467	1473	m8	hsa-miR-23a^brain	AUCACAUUGCCAGGGAUUUCC
miR-23	1467	1473	m8	hsa-miR-23b^brain	AUCACAUUGCCAGGGAUUACC
miR-27	1987	1993	m8	hsa-miR-27a^brain	UUCACAGUGGCUAAGUUCCGC
miR-27	1987	1993	m8	hsa-miR-27b^brain	UUCACAGUGGCUAAGUUCUGC
miR-299-3p	2182	2188	1A	hsa-miR-299-3p	UAUGUGGGAUGGUAAACCGCUU
miR-323	1467	1473	1A	hsa-miR-323^brain	GCACAUUACACGGUCGACCUCU
miR-369-3p	2260	2266	1A	hsa-miR-369-3p	AAUAAUACAUGGUUGAUCUUU
miR-374	2260	2267	1A,m8	hsa-miR-374	UUAUAAUACAACCUGAUAAGUG
miR-384	1862	1868	1A	hsa-miR-384	AUUCCUAGAAAUUGUUCAUA
miR-485-3p	962	969	1A,m8	hsa-miR-485-3p	GUCAUACACGGCUCUCCUCUCU
miR-491	1006	1012	1A	hsa-miR-491^brain	AGUGGGGAACCCUUCCAUGAGGA
miR-96	1558	1564	1A	hsa-miR-96^brain	UUUGGCACUAGCACAUUUUUGC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.