Gene Page

Gene Page: MBD5

Summary

GeneID

55777

Symbol

MBD5

Synonyms

FLJ11113|FLJ30517|KIAA1461|MRD1

Description

methyl-CpG binding domain protein 5

Locus tag

Gene type

protein-coding

Map location

2q23.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_I

genome scan meta-analysis

Psr: 0.023

GSMA_IIA

genome scan meta-analysis (All samples)

Psr: 0.02395

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0003677

DNA binding

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005634

nucleus

IEA

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
KIAA1549	FLJ11731 \| FLJ38703 \| FLJ40644	KIAA1549	-	HPRD	12421765

Pathway annotation

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-141/200a	23	29	m8	hsa-miR-141	UAACACUGUCUGGUAAAGAUGG
miR-141/200a	23	29	m8	hsa-miR-200a	UAACACUGUCUGGUAACGAUGU
miR-142-5p	404	410	m8	hsa-miR-142-5p	CAUAAAGUAGAAAGCACUAC
miR-17-5p/20/93.mr/106/519.d	403	409	1A	hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAGU
				hsa-miR-20a^brain	UAAAGUGCUUAUAGUGCAGGUAG
				hsa-miR-106a	AAAAGUGCUUACAGUGCAGGUAGC
				hsa-miR-106b^SZ	UAAAGUGCUGACAGUGCAGAU
				hsa-miR-20b^SZ	CAAAGUGCUCAUAGUGCAGGUAG
				hsa-miR-519d	CAAAGUGCCUCCCUUUAGAGUGU
miR-326	469	475	1A	hsa-miR-326	CCUCUGGGCCCUUCCUCCAG
miR-374	275	281	1A	hsa-miR-374	UUAUAAUACAACCUGAUAAGUG
miR-376	520	526	m8	hsa-miR-376a	AUCAUAGAGGAAAAUCCACGU
miR-376	520	526	m8	hsa-miR-376b	AUCAUAGAGGAAAAUCCAUGUU
miR-381	317	323	1A	hsa-miR-381	UAUACAAGGGCAAGCUCUCUGU
miR-493-5p	433	439	1A	hsa-miR-493-5p	UUGUACAUGGUAGGCUUUCAUU
				hsa-miR-493-5p	UUGUACAUGGUAGGCUUUCAUU
				hsa-miR-493-5p	UUGUACAUGGUAGGCUUUCAUU
miR-494	294	300	m8	hsa-miR-494^brain	UGAAACAUACACGGGAAACCUCUU
miR-496	357	363	1A	hsa-miR-496	AUUACAUGGCCAAUCUC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.