Gene Page: HR

Summary
GeneID  55806
Symbol  HR
Synonyms  ALUNC|AU|HSA277165
Description  hairless homolog (mouse)
See related  HGNC:5172|MIM:602302|Ensembl:ENSG00000168453|HPRD:03808|
Locus tag  -
Gene type  protein-coding
Map location  8p21.2
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.031 
GSMA_IIEgenome scan meta-analysis (European-ancestry samples)Psr: 0.00057 
GSMA_IIAgenome scan meta-analysis (All samples)Psr: 0.03086 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
GP1BA0.470.47
MUC10.470.34
PMFBP10.460.34
FBF10.460.43
PLEKHG40.460.33
INADL0.440.34
KISS1R0.440.10
CCDC88C0.430.23
COL7A10.430.42
KIAA18750.430.30
Top 10 negatively co-expressed genes
BRP44-0.32-0.42
TMEM126A-0.31-0.38
C18orf32-0.31-0.46
PXMP3-0.31-0.37
TMEM70-0.30-0.36
THOC7-0.30-0.35
POLE4-0.29-0.35
SC5DL-0.29-0.33
GTF3A-0.29-0.37
COMMD7-0.29-0.37
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0003700transcription factor activityNAS9445480 
GO:0003714transcription corepressor activityIEA-
GO:0005515protein bindingIEA-
GO:0008270zinc ion bindingIEA-
GO:0046872metal ion bindingIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006355regulation of transcription, DNA-dependentNAS9445480 
GO:0016481negative regulation of transcriptionIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005634nucleusNAS9445480 
GO:0016604nuclear bodyIEA-
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
HDAC1DKFZp686H12203 | GON-10 | HD1 | RPD3 | RPD3L1histone deacetylase 1-HPRD,BioGRID11641275 
HDAC2RPD3 | YAF1histone deacetylase 2Affinity Capture-WesternBioGRID11641275 
HDAC3HD3 | RPD3 | RPD3-2histone deacetylase 3Affinity Capture-WesternBioGRID11641275 
HDAC5FLJ90614 | HD5 | NY-CO-9histone deacetylase 5Affinity Capture-WesternBioGRID11641275 
THRAAR7 | EAR7 | ERB-T-1 | ERBA | ERBA1 | MGC000261 | MGC43240 | NR1A1 | THRA1 | THRA2 | c-ERBA-1thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian)Affinity Capture-WesternBioGRID11641275 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-369-3p126812741Ahsa-miR-369-3pAAUAAUACAUGGUUGAUCUUU
miR-374126812751A,m8hsa-miR-374UUAUAAUACAACCUGAUAAGUG
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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