Gene Page: RAG1AP1

Summary
GeneID  55974
Symbol  RAG1AP1
Synonyms  SCP|slv
Description  recombination activating gene 1 activating protein 1
See related  HGNC:30657|Ensembl:ENSG00000169241|HPRD:17427|
Locus tag  RP11-540D14.5
Gene type  protein-coding
Map location  1q22
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.0235 
GSMA_IIAgenome scan meta-analysis (All samples)Psr: 0.00814 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
C1orf1140.830.76
SSB0.820.78
LARP70.820.77
BCCIP0.800.77
GKAP10.800.70
CEP700.790.75
PPIL40.790.69
IFT810.780.72
NUCB20.780.78
CCDC520.780.62
Top 10 negatively co-expressed genes
MT-CO2-0.47-0.49
AF347015.27-0.47-0.49
HLA-F-0.47-0.48
AF347015.2-0.47-0.52
AF347015.31-0.46-0.51
MT-CYB-0.46-0.49
AF347015.33-0.46-0.49
AF347015.15-0.45-0.49
AF347015.8-0.45-0.47
CLIC3-0.45-0.55
Gene Ontology
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006310DNA recombinationIEA-
GO:0045815positive regulation of gene expression, epigeneticISS8630032 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005634nucleusIC8630032 
GO:0016020membraneIEA-
GO:0016021integral to membraneIEA-
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-1331341401Ahsa-miR-133aUUGGUCCCCUUCAACCAGCUGU
hsa-miR-133bUUGGUCCCCUUCAACCAGCUA
miR-91361431A,m8hsa-miR-9SZUCUUUGGUUAUCUAGCUGUAUGA
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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