Gene Page: PCDHB3

Summary
GeneID  56132
Symbol  PCDHB3
Synonyms  PCDH-BETA3
Description  protocadherin beta 3
See related  HGNC:8688|MIM:606329|Ensembl:ENSG00000113205|HPRD:08398|
Locus tag  -
Gene type  protein-coding
Map location  5q31
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.0032 
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 2 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
YWHAG0.900.90
SV2A0.890.90
ATXN7L30.890.88
NUDCD30.890.89
ABR0.890.91
EPB41L10.880.89
SCAMP50.880.89
FBXO310.880.89
WDR370.880.91
MFN20.880.89
Top 10 negatively co-expressed genes
GNG11-0.62-0.62
AP002478.3-0.61-0.60
HIGD1B-0.61-0.56
AF347015.21-0.60-0.55
AC098691.2-0.60-0.60
FXYD1-0.60-0.52
NOSTRIN-0.60-0.53
C1orf54-0.60-0.63
MT-CO2-0.59-0.53
SAT1-0.58-0.64
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005509calcium ion bindingIEA-
GO:0005515protein bindingNAS11322959 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0007416synaptogenesisTASSynap (GO term level: 6)12231349 
GO:0007268synaptic transmissionTASneuron, Synap, Neurotransmitter (GO term level: 6)12231349 
GO:0007155cell adhesionTAS10380929 
GO:0007156homophilic cell adhesionIEA-
GO:0016339calcium-dependent cell-cell adhesionNAS11322959 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005886plasma membraneIEA-
GO:0005887integral to plasma membraneTAS10380929 
 
Pathway annotation


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