Gene Page

Gene Page: CLDND1

Summary

GeneID

56650

Symbol

CLDND1

Synonyms

C3orf4|GENX-3745|MGC111162|MGC3316|MGC9861

Description

claudin domain containing 1

Locus tag

Gene type

protein-coding

Map location

3q12.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIA

genome scan meta-analysis (All samples)

Psr: 0.04047

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.04359

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0016020

membrane

IEA

GO:0016021

integral to membrane

IEA

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-124/506	952	958	m8	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
miR-124/506	952	958	m8	hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-22	553	559	m8	hsa-miR-22^brain	AAGCUGCCAGUUGAAGAACUGU
miR-221/222	1082	1088	1A	hsa-miR-221^brain	AGCUACAUUGUCUGCUGGGUUUC
miR-221/222	1082	1088	1A	hsa-miR-222^brain	AGCUACAUCUGGCUACUGGGUCUC
miR-26	609	616	1A,m8	hsa-miR-26a^brain	UUCAAGUAAUCCAGGAUAGGC
miR-26	609	616	1A,m8	hsa-miR-26b^SZ	UUCAAGUAAUUCAGGAUAGGUU
miR-30-5p	605	611	m8	hsa-miR-30a-5p	UGUAAACAUCCUCGACUGGAAG
				hsa-miR-30c^brain	UGUAAACAUCCUACACUCUCAGC
				hsa-miR-30d^SZ	UGUAAACAUCCCCGACUGGAAG
				hsa-miR-30b^SZ	UGUAAACAUCCUACACUCAGCU
				hsa-miR-30e-5p	UGUAAACAUCCUUGACUGGA
miR-329	980	987	1A,m8	hsa-miR-329^brain	AACACACCUGGUUAACCUCUUU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.