Gene Page: OTUD7B

Summary
GeneID  56957
Symbol  OTUD7B
Synonyms  CEZANNE|ZA20D1
Description  OTU domain containing 7B
See related  HGNC:16683|MIM:611748|Ensembl:ENSG00000163113|HPRD:10313|
Locus tag  -
Gene type  protein-coding
Map location  1q21.2
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.0235 
GSMA_IIAgenome scan meta-analysis (All samples)Psr: 0.00814 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
Top 10 negatively co-expressed genes
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0003677DNA bindingIEA-
GO:0005515protein bindingIPI11463333 |18029035 
GO:0004221ubiquitin thiolesterase activityIEA-
GO:0008270zinc ion bindingIEA-
GO:0008234cysteine-type peptidase activityIEA-
GO:0008233peptidase activityIEA-
GO:0046872metal ion bindingIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006511ubiquitin-dependent protein catabolic processIEA-
GO:0016579protein deubiquitinationIEA-
GO:0043124negative regulation of I-kappaB kinase/NF-kappaB cascadeIDA11463333 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005634nucleusIDA11463333 
GO:0005737cytoplasmIDA11463333 
GO:0005737cytoplasmIEA-
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
TRAF6MGC:3310 | RNF85TNF receptor-associated factor 6-HPRD,BioGRID11463333 
-HPRD9928991 
UBCHMG20ubiquitin C-HPRD12682062 
 
Pathway annotation
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-1378478531Ahsa-miR-137UAUUGCUUAAGAAUACGCGUAG
miR-1463803861Ahsa-miR-146aUGAGAACUGAAUUCCAUGGGUU
hsa-miR-146bbrainUGAGAACUGAAUUCCAUAGGCU
miR-153155715641A,m8hsa-miR-153UUGCAUAGUCACAAAAGUGA
miR-19142814351A,m8hsa-miR-19aUGUGCAAAUCUAUGCAAAACUGA
hsa-miR-19bUGUGCAAAUCCAUGCAAAACUGA
miR-218420426m8hsa-miR-218brainUUGUGCUUGAUCUAACCAUGU
hsa-miR-218brainUUGUGCUUGAUCUAACCAUGU
miR-320148314891Ahsa-miR-320AAAAGCUGGGUUGAGAGGGCGAA
miR-448155815641Ahsa-miR-448UUGCAUAUGUAGGAUGUCCCAU
miR-495114311491Ahsa-miR-495brainAAACAAACAUGGUGCACUUCUUU
miR-9396402m8hsa-miR-9SZUCUUUGGUUAUCUAGCUGUAUGA
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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