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|
| GeneID |
5961
|
| Symbol |
PRPH2
|
| Synonyms |
AOFMD|AVMD|PRPH|RDS|RP7|TSPAN22|rd2
|
| Description |
peripherin 2 (retinal degeneration, slow) |
| See related |
HGNC:9942|MIM:179605|Ensembl:ENSG00000112619|HPRD:01553| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
6p21.2-p12.3 |
|
| |
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|
| Gene set name |
Method of gene set |
Evidence |
Info |
| GSMA_I | genome scan meta-analysis | Psr: 0.033 | | | GSMA_IIE | genome scan meta-analysis (European-ancestry samples) | Psr: 0.04433 | |
|
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| General Gene Expression (microarray) ? |
|
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| |
| Gene Expression in Brain Regions (new) |
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| |
| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| ATP9B | 0.75 | 0.81 | | |
| TRMT2B | 0.74 | 0.76 | | |
| WHAMM | 0.72 | 0.74 | | |
| WDR42A | 0.72 | 0.76 | | |
| ABAT | 0.72 | 0.75 | | |
| PPARD | 0.72 | 0.77 | | |
| STAT5B | 0.72 | 0.72 | | |
| NSUN4 | 0.71 | 0.69 | | |
| FAM82A2 | 0.70 | 0.73 | | |
| CASP9 | 0.70 | 0.73 | | |
Top 10 negatively co-expressed genes | | AF347015.21 | -0.48 | -0.30 | | |
| IL32 | -0.40 | -0.30 | | |
| AF347015.18 | -0.40 | -0.22 | | |
| MT-CO2 | -0.40 | -0.25 | | |
| AF347015.31 | -0.39 | -0.26 | | |
| AF347015.8 | -0.38 | -0.23 | | |
| AL139819.3 | -0.38 | -0.35 | | |
| FAM159B | -0.38 | -0.45 | | |
| MT-CYB | -0.37 | -0.23 | | |
| AF347015.2 | -0.37 | -0.18 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005515 | protein binding | IEA | | - |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0007155 | cell adhesion | IEA | | - |
| GO:0007601 | visual perception | TAS | | 1749427 |
| GO:0050896 | response to stimulus | IEA | | - |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0016020 | membrane | IEA | | - |
| GO:0016021 | integral to membrane | TAS | | 1749427 |
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