Gene Page

Home
Datasets
Search
Analysis & Tools
Documents
About SZGR
Quick search: (e.g. 207 or AKT)

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

Release Site Map Support Contact us

Gene Page: RIT1

Summary

GeneID

6016

Symbol

RIT1

Synonyms

MGC125864|MGC125865|RIBB|RIT|ROC1

Description

Ras-like without CAAX 1

Locus tag

Gene type

protein-coding

Map location

1q22

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_I

genome scan meta-analysis

Psr: 0.0235

GSMA_IIA

genome scan meta-analysis (All samples)

Psr: 0.00814

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

PHB2

0.88

0.92

VPS72

0.86

0.89

NXT1

0.86

0.84

BOD1

0.86

CCT7

0.85

0.86

MRPS6

0.85

0.87

BANF1

0.85

0.87

PDCD2L

0.84

0.88

ING4

0.84

0.87

CLPP

0.84

0.89

Top 10 negatively co-expressed genes

APOL1

-0.65

-0.74

APOL3

-0.65

-0.75

AF347015.33

-0.64

-0.75

AF347015.26

-0.64

-0.78

AIFM3

-0.64

-0.70

HEPN1

-0.63

-0.70

MT-CO2

-0.63

-0.71

AL132868.3

-0.63

-0.67

MT-CYB

-0.62

-0.73

ZBTB7B

-0.62

-0.69

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0000166

nucleotide binding

IEA

GO:0005516

calmodulin binding

TAS

8918462

GO:0005525

GTP binding

IEA

GO:0005525

GTP binding

TAS

8824319

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0007165

signal transduction

TAS

8918462

GO:0007264

small GTPase mediated signal transduction

EXP

10712923

GO:0007264

small GTPase mediated signal transduction

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005622

intracellular

IEA

GO:0005886

plasma membrane

TAS

8824319

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
C1orf103	FLJ11269 \| RIF1 \| RP11-96K19.1	chromosome 1 open reading frame 103	Two-hybrid	BioGRID	16169070
MLLT4	AF-6 \| AF6 \| AFADIN \| FLJ34371 \| RP3-431P23.3	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4	-	HPRD,BioGRID	10545207
PTN	HARP \| HBGF8 \| HBNF \| NEGF1	pleiotrophin	Two-hybrid	BioGRID	16169070
RALGDS	FLJ20922 \| RGF \| RalGEF	ral guanine nucleotide dissociation stimulator	-	HPRD,BioGRID	10545207
RLF	MGC142226 \| ZN-15L \| ZNF292L	rearranged L-myc fusion	-	HPRD,BioGRID	10545207

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-320	1085	1091	1A	hsa-miR-320	AAAAGCUGGGUUGAGAGGGCGAA
miR-542-3p	209	215	1A	hsa-miR-542-3p	UGUGACAGAUUGAUAACUGAAA

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.