|
|
| GeneID |
6309
|
| Symbol |
SC5DL
|
| Synonyms |
ERG3|S5DES|SC5D
|
| Description |
sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like |
| See related |
HGNC:10547|MIM:602286|Ensembl:ENSG00000109929|HPRD:09078| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
11q23.3 |
|
| |
|
|
| Gene set name |
Method of gene set |
Evidence |
Info |
| GSMA_I | genome scan meta-analysis | Psr: 0.006 | |
|
| |
| General Gene Expression (microarray) ? |
|
 |
| |
| Gene Expression in Brain Regions (new) |
|
| |
| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| SECTM1 | 0.76 | 0.19 | | |
| RXRG | 0.75 | 0.26 | | |
| KISS1R | 0.73 | 0.16 | | |
| MADCAM1 | 0.73 | 0.39 | | |
| FAM40B | 0.72 | 0.22 | | |
| KRTCAP3 | 0.72 | 0.23 | | |
| TSPAN9 | 0.71 | 0.31 | | |
| EXOC3L | 0.71 | 0.16 | | |
| PROK2 | 0.71 | -0.01 | | |
| CCDC88C | 0.70 | 0.07 | | |
Top 10 negatively co-expressed genes | | PPP2R5A | -0.19 | -0.11 | | |
| NDRG1 | -0.18 | -0.02 | | |
| CHPT1 | -0.17 | -0.08 | | |
| TM4SF18 | -0.17 | -0.19 | | |
| AL139819.3 | -0.17 | -0.21 | | |
| TMEM171 | -0.16 | -0.07 | | |
| EMCN | -0.16 | -0.13 | | |
| MT-CYB | -0.16 | -0.15 | | |
| GGTA1 | -0.16 | -0.15 | | |
| AF347015.31 | -0.16 | -0.14 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0000248 | C-5 sterol desaturase activity | TAS | | 8976377 |
| GO:0050046 | lathosterol oxidase activity | IEA | | - |
| GO:0005506 | iron ion binding | IEA | | - |
| GO:0016491 | oxidoreductase activity | IEA | | - |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0016126 | sterol biosynthetic process | IEA | | - |
| GO:0006629 | lipid metabolic process | TAS | | 8976377 |
| GO:0055114 | oxidation reduction | IEA | | - |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005789 | endoplasmic reticulum membrane | IEA | | - |
| GO:0005783 | endoplasmic reticulum | IEA | | - |
| GO:0016020 | membrane | IEA | | - |
| GO:0016021 | integral to membrane | IEA | | - |
| |
|
|
- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
|
