Gene Page: SET

Summary
GeneID  6418
Symbol  SET
Synonyms  2PP2A|I2PP2A|IGAAD|IPP2A2|PHAPII|TAF-I|TAF-IBETA
Description  SET nuclear oncogene
See related  HGNC:10760|MIM:600960|Ensembl:ENSG00000119335|HPRD:09023|
Locus tag  -
Gene type  protein-coding
Map location  9q34
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
NetworkShortest path distance of core genes in the Human protein-protein interaction networkContribution to shortest path in PPI network: 0.0103 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
Top 10 negatively co-expressed genes
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0004864protein phosphatase inhibitor activityTAS8626647 
GO:0008601protein phosphatase type 2A regulator activityTAS11555662 
GO:0042393histone bindingTAS11555662 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006334nucleosome assemblyIEA-
GO:0006334nucleosome assemblyTAS1630450 
GO:0006337nucleosome disassemblyTAS11555662 
GO:0006260DNA replicationTAS7753797 
GO:0006913nucleocytoplasmic transportNAS11555662 
GO:0035067negative regulation of histone acetylationTAS11555662 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005634nucleusIDA11555662 
GO:0005634nucleusIEA-
GO:0005737cytoplasmIEA-
GO:0005783endoplasmic reticulumIDA11555662 
GO:0048471perinuclear region of cytoplasmIDA11555662 
 
Protein-protein InteractionsShown by network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
ANP32AC15orf1 | I1PP2A | LANP | MAPM | MGC119787 | MGC150373 | PHAP1 | PHAPI | PP32acidic (leucine-rich) nuclear phosphoprotein 32 family, member Ain vitro
in vivo
BioGRID11163245 |11909973 
APEX1APE | APE-1 | APE1 | APEN | APEX | APX | HAP1 | REF-1 | REF1APEX nuclease (multifunctional DNA repair enzyme) 1-HPRD12628186 
Affinity Capture-WesternBioGRID12524539 
CDK5R1CDK5P35 | CDK5R | MGC33831 | NCK5A | p23 | p25 | p35 | p35nck5acyclin-dependent kinase 5, regulatory subunit 1 (p35)-HPRD,BioGRID11741927 
CDKN1ACAP20 | CDKN1 | CIP1 | MDA-6 | P21 | SDI1 | WAF1 | p21CIP1cyclin-dependent kinase inhibitor 1A (p21, Cip1)-HPRD,BioGRID12407107 
DGKEDAGK6 | DGKdiacylglycerol kinase, epsilon 64kDaAffinity Capture-MSBioGRID17353931 
ELAVL1ELAV1 | HUR | Hua | MelGELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)-HPRD11018049 |11565755 
GZMACTLA3 | HFSPgranzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)-HPRD,BioGRID11555662 
HIST3H3H3.4 | H3/g | H3FT | H3t | MGC126886 | MGC126888histone cluster 3, H3-HPRD,BioGRID11163245 
HMGB2HMG2high-mobility group box 2-HPRD,BioGRID11909973 
KLF5BTEB2 | CKLF | IKLFKruppel-like factor 5 (intestinal)Affinity Capture-MS
Affinity Capture-Western
Reconstituted Complex
BioGRID14612398 
NME1AWD | GAAD | NB | NBS | NDPK-A | NDPKA | NM23 | NM23-H1non-metastatic cells 1, protein (NM23A) expressed in-HPRD,BioGRID12628186 
RGS20RGSZ1 | ZGAP1regulator of G-protein signaling 20Affinity Capture-MSBioGRID17353931 
SETBP1KIAA0437 | SEBSET binding protein 1-HPRD,BioGRID11231286 
TAF1AMGC:17061 | RAFI48 | SL1 | TAFI48TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa-HPRD,BioGRID11163245 
THAP7MGC10963THAP domain containing 7Two-hybridBioGRID16189514 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-125/3519971003m8hsa-miR-125bbrainUCCCUGAGACCCUAACUUGUGA
hsa-miR-125abrainUCCCUGAGACCCUUUAACCUGUG
miR-128410416m8hsa-miR-128aUCACAGUGAACCGGUCUCUUUU
hsa-miR-128bUCACAGUGAACCGGUCUCUUUC
miR-1457857911Ahsa-miR-145GUCCAGUUUUCCCAGGAAUCCCUU
miR-1461471531Ahsa-miR-146aUGAGAACUGAAUUCCAUGGGUU
hsa-miR-146bbrainUGAGAACUGAAUUCCAUAGGCU
miR-17-5p/20/93.mr/106/519.d980986m8hsa-miR-17-5pCAAAGUGCUUACAGUGCAGGUAGU
hsa-miR-20abrainUAAAGUGCUUAUAGUGCAGGUAG
hsa-miR-106aAAAAGUGCUUACAGUGCAGGUAGC
hsa-miR-106bSZUAAAGUGCUGACAGUGCAGAU
hsa-miR-20bSZCAAAGUGCUCAUAGUGCAGGUAG
hsa-miR-519dCAAAGUGCCUCCCUUUAGAGUGU
miR-1948408461Ahsa-miR-194UGUAACAGCAACUCCAUGUGGA
miR-1997847901Ahsa-miR-199aCCCAGUGUUCAGACUACCUGUUC
hsa-miR-199bCCCAGUGUUUAGACUAUCUGUUC
miR-234224281Ahsa-miR-23abrainAUCACAUUGCCAGGGAUUUCC
hsa-miR-23bbrainAUCACAUUGCCAGGGAUUACC
miR-24*160116071Ahsa-miR-189GUGCCUACUGAGCUGAUAUCAGU
miR-330835841m8hsa-miR-330brainGCAAAGCACACGGCCUGCAGAGA
miR-3383173231Ahsa-miR-338brainUCCAGCAUCAGUGAUUUUGUUGA
miR-376c419425m8hsa-miR-376cAACAUAGAGGAAAUUCCACG
miR-378168816941Ahsa-miR-378CUCCUGACUCCAGGUCCUGUGU
miR-493-5p8268321Ahsa-miR-493-5pUUGUACAUGGUAGGCUUUCAUU
miR-4958388441Ahsa-miR-495brainAAACAAACAUGGUGCACUUCUUU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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