Gene Page: T

Summary
GeneID  6862
Symbol  T
Synonyms  MGC104817|TFT
Description  T, brachyury homolog (mouse)
See related  HGNC:11515|MIM:601397|Ensembl:ENSG00000164458|HPRD:03236|
Locus tag  RP11-459F1.1
Gene type  protein-coding
Map location  6q27
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]Click to show detail
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
RBM340.910.90
SARNP0.910.88
ARL30.910.89
TMSB100.890.88
TPRKB0.890.86
LSM30.890.89
PSMA20.880.85
AC008073.10.880.87
CWC150.880.88
EIF3M0.870.86
Top 10 negatively co-expressed genes
SLC6A12-0.62-0.74
HLA-F-0.61-0.70
TINAGL1-0.60-0.73
ATP10A-0.60-0.71
APOL3-0.60-0.72
GPER-0.59-0.69
ZBTB7B-0.59-0.72
HLA-E-0.58-0.70
PRELP-0.57-0.67
EPAS1-0.57-0.70
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0003700transcription factor activityIEA-
GO:0003700transcription factor activityNAS8963900 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0001756somitogenesisIEA-
GO:0001570vasculogenesisIEA-
GO:0001843neural tube closureIEA-
GO:0001839neural plate morphogenesisIEA-
GO:0006355regulation of transcription, DNA-dependentIEA-
GO:0007165signal transductionNAS8963900 
GO:0008284positive regulation of cell proliferationIEA-
GO:0009653anatomical structure morphogenesisIEA-
GO:0008595determination of anterior/posterior axis, embryoTAS8963900 
GO:0007498mesoderm developmentTAS8963900 
GO:0007275multicellular organismal developmentIEA-
GO:0030903notochord developmentIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005634nucleusIEA-
GO:0005737cytoplasmIEA-
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-2196126191A,m8hsa-miR-219brainUGAUUGUCCAAACGCAAUUCU
miR-96076131Ahsa-miR-9SZUCUUUGGUUAUCUAGCUGUAUGA
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


Copyright © Bioinformatics and Systems Medicine Laboratory All Rights Reserved since 2009.