Gene Page: CNTN2

Summary
GeneID  6900
Symbol  CNTN2
Synonyms  AXT|DKFZp781D102|FLJ42746|MGC157722|TAG-1|TAX|TAX1
Description  contactin 2 (axonal)
See related  HGNC:2172|MIM:190197|Ensembl:ENSG00000184144|HPRD:01826|
Locus tag  -
Gene type  protein-coding
Map location  1q32.1
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 2 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
ZBED50.940.91
ZNF280D0.940.94
UTP60.940.93
DHX290.930.94
ZNF5830.930.94
CEP570.930.95
ZNF5270.930.93
ZNF4610.930.93
NT5C30.930.93
ZNF1870.930.93
Top 10 negatively co-expressed genes
HLA-F-0.77-0.82
MT-CO2-0.76-0.87
AF347015.31-0.76-0.87
AIFM3-0.76-0.81
AF347015.27-0.75-0.85
AF347015.33-0.75-0.86
IFI27-0.75-0.88
MT-CYB-0.74-0.86
TSC22D4-0.74-0.82
FXYD1-0.74-0.86
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005515protein bindingIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0001764neuron migrationIEAneuron (GO term level: 8)-
GO:0007155cell adhesionNAS8425542 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0030424axonIEAneuron, axon, Neurotransmitter (GO term level: 6)-
GO:0005886plasma membraneTAS8425542 
GO:0005887integral to plasma membraneTAS8425542 
GO:0031225anchored to membraneIEA-
 
Protein-protein InteractionsShown by network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
CNTN1F3 | GP135contactin 1-HPRD,BioGRID12139915 
CNTNAP2AUTS15 | CASPR2 | CDFE | DKFZp781D1846 | NRXN4contactin associated protein-like 2-HPRD,BioGRID12975355 
EP300KAT3B | p300E1A binding protein p300Phenotypic SuppressionBioGRID11264182 
L1CAMCAML1 | CD171 | HSAS | HSAS1 | MASA | MIC5 | N-CAML1 | S10 | SPG1L1 cell adhesion moleculeL1-CAM interacts with TAG-1.BIND9837910 
-HPRD,BioGRID12139915 
NCANCSPG3 | FLJ44681neurocan-HPRD,BioGRID8663515 
NFYBCBF-A | CBF-B | HAP3 | NF-YBnuclear transcription factor Y, beta-HPRD,BioGRID9032250 
NRCAMKIAA0343 | MGC138845 | MGC138846neuronal cell adhesion molecule-HPRD,BioGRID12139915 
STARD13DLC2 | FLJ37385 | GT650StAR-related lipid transfer (START) domain containing 13Affinity Capture-WesternBioGRID14697242 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-34/4497597661A,m8hsa-miR-34abrainUGGCAGUGUCUUAGCUGGUUGUU
hsa-miR-34cAGGCAGUGUAGUUAGCUGAUUGC
hsa-miR-449UGGCAGUGUAUUGUUAGCUGGU
hsa-miR-449bAGGCAGUGUAUUGUUAGCUGGC
miR-495178817941Ahsa-miR-495brainAAACAAACAUGGUGCACUUCUUU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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