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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: TBL1X

Summary

GeneID

6907

Symbol

TBL1X

Synonyms

EBI|SMAP55|TBL1

Description

transducin (beta)-like 1X-linked

Locus tag

Gene type

protein-coding

Map location

Xp22.3

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Expression

P value: 1.886

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006355

regulation of transcription, DNA-dependent

IEA

GO:0006350

transcription

IEA

GO:0006511

ubiquitin-dependent protein catabolic process

IEA

GO:0007165

signal transduction

TAS

10330347

GO:0007605

sensory perception of sound

TAS

10330347

GO:0007601

visual perception

TAS

10330347

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005634

nucleus

IEA

Protein-protein Interactions

Shown by network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
CACYBP	GIG5 \| MGC87971 \| PNAS-107 \| RP1-102G20.6 \| S100A6BP \| SIP	calcyclin binding protein	-	HPRD,BioGRID	11389839
CORO2A	CLIPINB \| DKFZp686G19226 \| IR10 \| WDR2	coronin, actin binding protein, 2A	-	HPRD	12628926
CTNNB1	CTNNB \| DKFZp686D02253 \| FLJ25606 \| FLJ37923	catenin (cadherin-associated protein), beta 1, 88kDa	-	HPRD,BioGRID	11389839
GPS2	AMF-1 \| MGC104294 \| MGC119287 \| MGC119288 \| MGC119289	G protein pathway suppressor 2	GPS2 interacts with TBL1X (TBL1).	BIND	11931768
GPS2	AMF-1 \| MGC104294 \| MGC119287 \| MGC119288 \| MGC119289	G protein pathway suppressor 2	-	HPRD,BioGRID	11931768
HDAC3	HD3 \| RPD3 \| RPD3-2	histone deacetylase 3	Affinity Capture-MS Affinity Capture-Western Reconstituted Complex	BioGRID	10809664 \|11931768
			HDAC3 interacts with TBL1.	BIND	12628926
			-	HPRD	10944117 \|11931768
HDAC5	FLJ90614 \| HD5 \| NY-CO-9	histone deacetylase 5	Affinity Capture-Western	BioGRID	11931768
HIST2H2AA3	H2A \| H2A.2 \| H2A/O \| H2A/q \| H2AFO \| H2a-615 \| HIST2H2AA	histone cluster 2, H2aa3	Reconstituted Complex	BioGRID	12628926
HIST2H2BE	GL105 \| H2B \| H2B.1 \| H2B/q \| H2BFQ \| MGC119802 \| MGC119804 \| MGC129733 \| MGC129734	histone cluster 2, H2be	H2B interacts with TBL1.	BIND	12628926
HIST2H2BE		histone cluster 2, H2be	-	HPRD,BioGRID	12628926
HIST2H3C	H3 \| H3.2 \| H3/M \| H3F2 \| H3FM \| MGC9629	histone cluster 2, H3c	Reconstituted Complex	BioGRID	12628926
HIST2H4A	FO108 \| H4 \| H4/n \| H4F2 \| H4FN \| HIST2H4	histone cluster 2, H4a	Reconstituted Complex	BioGRID	12628926
HIST2H4A	FO108 \| H4 \| H4/n \| H4F2 \| H4FN \| HIST2H4	histone cluster 2, H4a	H4 interacts with TBL1.	BIND	12628926
MAP3K7IP2	FLJ21885 \| KIAA0733 \| TAB2	mitogen-activated protein kinase kinase kinase 7 interacting protein 2	Reconstituted Complex	BioGRID	12150997
NCOR1	KIAA1047 \| MGC104216 \| N-CoR \| TRAC1 \| hCIT529I10 \| hN-CoR	nuclear receptor co-repressor 1	N-CoR interacts with TBL1.	BIND	12628926
NCOR1	KIAA1047 \| MGC104216 \| N-CoR \| TRAC1 \| hCIT529I10 \| hN-CoR	nuclear receptor co-repressor 1	Affinity Capture-MS Affinity Capture-Western Co-fractionation Reconstituted Complex	BioGRID	10809664 \|10944117 \|11931768 \|12628926
NCOR2	CTG26 \| SMRT \| SMRTE \| SMRTE-tau \| TNRC14 \| TRAC-1 \| TRAC1	nuclear receptor co-repressor 2	-	HPRD,BioGRID	10809664
SIAH1	FLJ08065 \| HUMSIAH \| Siah-1 \| Siah-1a \| hSIAH1	seven in absentia homolog 1 (Drosophila)	-	HPRD,BioGRID	11389839
SKP1	EMC19 \| MGC34403 \| OCP-II \| OCP2 \| SKP1A \| TCEB1L \| p19A	S-phase kinase-associated protein 1	-	HPRD,BioGRID	11389839
THRB	ERBA-BETA \| ERBA2 \| GRTH \| MGC126109 \| MGC126110 \| NR1A2 \| PRTH \| THR1 \| THRB1 \| THRB2	thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	Reconstituted Complex	BioGRID	10809664

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-129-5p	349	355	1A	hsa-miR-129^brain	CUUUUUGCGGUCUGGGCUUGC
miR-129-5p	349	355	1A	hsa-miR-129-5p	CUUUUUGCGGUCUGGGCUUGCU
miR-149	3287	3293	1A	hsa-miR-149^brain	UCUGGCUCCGUGUCUUCACUCC
miR-17-5p/20/93.mr/106/519.d	898	904	m8	hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAGU
				hsa-miR-20a^brain	UAAAGUGCUUAUAGUGCAGGUAG
				hsa-miR-106a	AAAAGUGCUUACAGUGCAGGUAGC
				hsa-miR-106b^SZ	UAAAGUGCUGACAGUGCAGAU
				hsa-miR-20b^SZ	CAAAGUGCUCAUAGUGCAGGUAG
				hsa-miR-519d	CAAAGUGCCUCCCUUUAGAGUGU
				hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAGU
				hsa-miR-20a^brain	UAAAGUGCUUAUAGUGCAGGUAG
				hsa-miR-106a	AAAAGUGCUUACAGUGCAGGUAGC
				hsa-miR-106b^SZ	UAAAGUGCUGACAGUGCAGAU
				hsa-miR-20b^SZ	CAAAGUGCUCAUAGUGCAGGUAG
				hsa-miR-519d	CAAAGUGCCUCCCUUUAGAGUGU
miR-181	47	53	m8	hsa-miR-181a^brain	AACAUUCAACGCUGUCGGUGAGU
				hsa-miR-181b^SZ	AACAUUCAUUGCUGUCGGUGGG
				hsa-miR-181c^brain	AACAUUCAACCUGUCGGUGAGU
				hsa-miR-181d^brain	AACAUUCAUUGUUGUCGGUGGGUU
miR-182	346	352	1A	hsa-miR-182	UUUGGCAAUGGUAGAACUCACA
miR-299-5p	373	379	1A	hsa-miR-299-5p	UGGUUUACCGUCCCACAUACAU
miR-494	3428	3434	1A	hsa-miR-494^brain	UGAAACAUACACGGGAAACCUCUU
miR-539	863	869	1A	hsa-miR-539	GGAGAAAUUAUCCUUGGUGUGU
miR-96	345	352	1A,m8	hsa-miR-96^brain	UUUGGCACUAGCACAUUUUUGC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.